Miyakogusa Predicted Gene
- Lj5g3v1602360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1602360.1 Non Chatacterized Hit- tr|I1JBJ0|I1JBJ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44761 PE,81.82,0,Kinesin
motor, catalytic domain. ATPase.,Kinesin, motor domain;
Kinesin,Kinesin, motor domain; KINES,CUFF.55607.1
(2010 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kin... 801 0.0
gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Ki... 129 7e-29
gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-re... 84 4e-15
gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III ... 72 1e-11
gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kin... 62 1e-08
gnl|LJGI|BP040614 similar to UniRef100_A7Q9E6 Cluster: Chromosom... 54 3e-06
>gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (9%)
Length = 592
Score = 801 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 1595 aagaagataatgagcaaatgtccgaggtcttttatcagaaatatctccaagattcttcca 1654
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aagaagataatgagcaaatgtccgaggtcttttatcaaaaatatctccaagattcttcca 60
Query: 1655 aaacttactcggaacgaccatacaacacgttcatgggtggcaacaagttcaacattgcgg 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacttactcggaacgaccatacaacacgttcatgggtggcaacaagttcaacattgcgg 120
Query: 1715 gttcagatgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttac 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcagatgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttac 180
Query: 1775 tttggcaatttaatcattccaaacttaccagcatagccaatggcaatggatcaaaggcta 1834
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttggcaatttaatcattcccaacttaccagcatagccaatggcaatggatcaaaggcta 240
Query: 1835 ggaaacctatctcaaagtcagcaaaaagcccagaattgagcaagaacagtattcattctt 1894
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaacctatctcaaagtcagccaaaagcccagaattgagcaagaacagtattcattctt 300
Query: 1895 cttctcttggtccttcaccttcacgcaaacaaacaaatggtggtgtctcacatcgaacag 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttctcttggtccttcaccttcacgcaaacaaacaaatggtggtgtctcacatcgaacag 360
Query: 1955 gaaggcatccagctccaattgacatgaaacgtaagactggaagtagaaagtaaaaa 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaggcatccagctccaattgacatgaaacgtaagactggaagtagaaagtaaaaa 416
>gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (10%)
Length = 511
Score = 129 bits (65), Expect = 7e-29
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 1721 atgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttactttggc 1780
||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 191 atgacatggatgaacttgatgctgcaaccagtgattcctcggaacctgacttgctttggc 132
Query: 1781 aatttaatcattccaaactta 1801
|||||||||| ||||||||||
Sbjct: 131 aatttaatcactccaaactta 111
Score = 99.6 bits (50), Expect = 7e-20
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Minus
Query: 1418 ctcagagctttgattttgatgagatatcaacgaattcaccaccctggcccccagtgaaaa 1477
||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||
Sbjct: 422 ctcagggctttgattttgatgagatatcagcaaattcaccgccctggcccccagtg-aat 364
Query: 1478 gtccaggacaaaactctggggaagatgataaagaaactggttctggagactgggttgata 1537
|| ||| | || |||||| ||||| | |||||| |||| |||||| ||||| ||||
Sbjct: 363 gttcag-----agctatggggaggatgacagagaaacaggttatggagattgggtggata 309
Query: 1538 aagtcatggtaaacaagcaaga 1559
| ||||||||||||||||||||
Sbjct: 308 aggtcatggtaaacaagcaaga 287
>gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1;
Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 584
Score = 83.8 bits (42), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1749 cagtgattcctcagaacctgacttactttggcaatttaatcattccaaactta 1801
|||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 cagtgattcctcggaacctgacttgctttgncaatttaatcattccaaactta 53
>gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III secretion inner
membrane protein SctT; n=1; Chlamydia muridarum|Rep: Type
III secretion inner membrane protein SctT - Chlamydia
muridarum, partial (6%)
Length = 426
Score = 71.9 bits (36), Expect = 1e-11
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 1941 ctcacatcgaacaggaaggcatccagctccaattgacatgaaacgtaagactggaagtag 2000
|||||||||||||||||||||||||||| || ||||| |||||| || ||||| ||| |
Sbjct: 324 ctcacatcgaacaggaaggcatccagcttcagttgacgcgaaacggaaaactgggagtcg 265
Query: 2001 aaagtaaa 2008
||||||||
Sbjct: 264 aaagtaaa 257
>gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 512
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 1751 gtgattcctcagaacctgacttactttggcaatttaatcattccaaactta 1801
|||||||||| ||||||||||| ||||||| ||||||||| ||| ||||||
Sbjct: 1 gtgattcctcggaacctgacttgctttggctatttaatcactccgaactta 51
>gnl|LJGI|BP040614 similar to UniRef100_A7Q9E6 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 504
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 796 ttggcgggaagtgagagggttgataaatctgaggc 830
||||| ||||||||||||||||| |||||||||||
Sbjct: 391 ttggctggaagtgagagggttgaaaaatctgaggc 425