Miyakogusa Predicted Gene
- Lj5g3v1600740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1600740.1 tr|G7IDS4|G7IDS4_MEDTR BRCT domain-containing
protein OS=Medicago truncatula GN=MTR_1g087290 PE=4
SV,65.2,0,ZF_PHD_2,Zinc finger, PHD-finger; BRCT,BRCT domain;
seg,NULL; no description,NULL; no description,Zi,CUFF.55578.1
(3681 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP031190 similar to UniRef100_A7Q0L1 Cluster: Chromosom... 274 4e-72
gnl|LJGI|BP042201 230 5e-59
gnl|LJGI|AV771192 188 2e-46
gnl|LJGI|BW595330 homologue to UniRef100_O82136 Cluster: Cyclin ... 165 2e-39
>gnl|LJGI|BP031190 similar to UniRef100_A7Q0L1 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 488
Score = 274 bits (138), Expect = 4e-72
Identities = 180/194 (92%)
Strand = Plus / Minus
Query: 3474 ggacagaggagatgtaatgctaatttgtggtgatgaaagtggctcccttggctgtggaat 3533
||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 341 ggacagaggagatgtaatgctgatctgtggtgatgaaagtggctcccttagctgtggaat 282
Query: 3534 tggtactcatatcgattgctgcgatcctccattgccagaagttcctgaggaggattggtt 3593
|||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||
Sbjct: 281 tggtactcatattgattgctgtgatcctccatttccagaagttactgaggaggattggtt 222
Query: 3594 ctgtccaaaatgcagtagcacccaaaactggtcaaacaatccagctaaaaagaaaaagcg 3653
|||||| || ||||||||||||| |||||| ||||||||||||| ||||||||||| | |
Sbjct: 221 ctgtcccaagtgcagtagcaccccaaactgctcaaacaatccagttaaaaagaaaaggag 162
Query: 3654 tgcactgtctttat 3667
||||||||||||||
Sbjct: 161 tgcactgtctttat 148
>gnl|LJGI|BP042201
Length = 246
Score = 230 bits (116), Expect = 5e-59
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 3566 tgccagaagttcctgaggaggattggttctgtccaaaatgcagtagcacccaaaactggt 3625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgccagaagttcctgaggaggattggttctgtccaaaatgcagtagcacccaaaactggt 187
Query: 3626 caaacaatccagctaaaaagaaaaagcgtgcactgtctttatctaagagtaagtga 3681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 caaacaatccagctaaaaagaaaaagcgtgcactgtctttatctaagagtaagtga 131
>gnl|LJGI|AV771192
Length = 473
Score = 188 bits (95), Expect = 2e-46
Identities = 149/165 (90%), Gaps = 4/165 (2%)
Strand = Plus / Minus
Query: 3439 gctggtgatataccttgccaagtatgtggatccagggacagaggagatgtaatgctaatt 3498
||||| ||||||| || ||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 393 gctggcgatatacttttccaagtatgtggatccagggatagaggagatgtaatgggaatt 334
Query: 3499 tgtggtgatgaaagtggctcccttggctgtggaattggtactcatatcgattgctgcgat 3558
||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 333 tgtggtgatgaaagtggctcccttgcctgtggaattggtactcttactgattgctgcgat 274
Query: 3559 cctccattgcca-gaa---gttcctgaggaggattggttctgtcc 3599
|||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 273 cctccattgccacgaacgctctcctgaggaggattggttctgtcc 229
>gnl|LJGI|BW595330 homologue to UniRef100_O82136 Cluster: Cyclin D; n=1; Pisum
sativum|Rep: Cyclin D - Pisum sativum (Garden pea),
partial (6%)
Length = 490
Score = 165 bits (83), Expect = 2e-39
Identities = 107/115 (93%)
Strand = Plus / Plus
Query: 3441 tggtgatataccttgccaagtatgtggatccagggacagaggagatgtaatgctaatttg 3500
|||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 211 tggtgagataccttgccaagtatgtggattcagggacagaggagatgtaatgctgattta 270
Query: 3501 tggtgatgaaagtggctcccttggctgtggaattggtactcatatcgattgctgc 3555
|||||||||||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct: 271 tggtgatgaaagtgtctcccttggctgtggaattgctactcatatcagttgctgc 325