Miyakogusa Predicted Gene
- Lj5g3v1600680.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1600680.3 tr|G7IDS0|G7IDS0_MEDTR Beta xylosidase
OS=Medicago truncatula GN=MTR_1g087240 PE=4 SV=1,88.82,0,Beta-D-glucan
exohydrolase, C-terminal domain,Glycoside hydrolase family 3
C-terminal domain; (Trans,CUFF.55604.3
(1599 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV770828 similar to UniRef100_A7Q8M4 Cluster: Chromosom... 977 0.0
gnl|LJGI|TC69320 similar to UniRef100_A7Q8M4 Cluster: Chromosome... 496 e-139
gnl|LJGI|TC76757 similar to UniRef100_A7Q0L3 Cluster: Chromosome... 418 e-116
gnl|LJGI|TC72308 similar to UniRef100_A7Q8M4 Cluster: Chromosome... 311 7e-84
gnl|LJGI|TC64935 similar to UniRef100_A7Q0L3 Cluster: Chromosome... 131 1e-29
gnl|LJGI|TC78248 similar to UniRef100_A7Q8M4 Cluster: Chromosome... 56 7e-07
>gnl|LJGI|AV770828 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 527
Score = 977 bits (493), Expect = 0.0
Identities = 519/527 (98%), Gaps = 3/527 (0%)
Strand = Plus / Plus
Query: 373 agtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacctcaccaagagcta 432
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 agtcaagcatatggcac---tggtccaagagatgtgtgcacccaacctcaccaagagcta 60
Query: 433 gcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccctctttgcct 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccctctttgcct 120
Query: 493 ctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatgccactgtc 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatgccactgtc 180
Query: 553 acaatgataggaaactatgctggtattggttgtagatacacaagccctttagaaggaata 612
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 181 acaatgataggaaactatgctggtattggttatagatacacaagcccttgagaaggaata 240
Query: 613 ggaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggcttgcactgatgac 672
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 241 ggaaagtacgcaaagactatccacgagctcgggtgtgcgaatgtggctggcactgatgac 300
Query: 673 aagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttctagtgatg 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttctagtgatg 360
Query: 733 ggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttcttcccggg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttcttcccggg 420
Query: 793 cgtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggcccaaccattttggtc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggcccaaccattttggtc 480
Query: 853 ttaatgtctggtgggcctgtggatataacttttgcaaagaatgaccc 899
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaatgtctggtgggcctgtggatataacttttgcaaagaatgaccc 527
>gnl|LJGI|TC69320 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1040
Score = 496 bits (250), Expect = e-139
Identities = 712/866 (82%)
Strand = Plus / Plus
Query: 1 atgtgtgtgaaggaaggtaatgtggcgagtgtgatgtgttcttataatcaagttaatggt 60
||||||||||| ||||| || || || ||||||||||||||||| |||||||| |||||
Sbjct: 169 atgtgtgtgaaagaaggcaaagtagcaagtgtgatgtgttcttacaatcaagtcaatggg 228
Query: 61 gtccctacctgtgcagacgccaacctcctcaagagaactgttcgtggccaatggggtctt 120
||||| |||||||||||| |||||||||| |||||||| |||||||| |||||| ||||
Sbjct: 229 gtcccaacctgtgcagaccccaacctcctaaagagaacagttcgtggacaatggcatctt 288
Query: 121 aatgggtacattgtatcagactgtgactctgttggggtgttctacactagccaacattac 180
||||||||||||| |||||||||||||| || || ||||| || | || ||||||||||
Sbjct: 289 gatgggtacattgtttcagactgtgactcagtgggagtgttttatagtaaccaacattac 348
Query: 181 acatcaacaccagaagaagctgctgctgatgccattaaagcaggcttggatttggattgt 240
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 349 acatcaacaccagaagaagctgctgctgatgccattaaagcaggtttagatttagattgt 408
Query: 241 gggcctttcttaggggcccatacacagaatgctgtcaagagaggcctgttaagtgaagct 300
|| |||||| |||| || || ||| | || || || | ||| ||||||| |||||
Sbjct: 409 ggtcctttcctaggattgcacacgcaggacgcggtgaaaaaaggtttgttaagcgaagca 468
Query: 301 gatgtgaatgttgcattagcaaacacattgacagttcaaatgaggctagggatgtttgag 360
||||||| || ||| || |||||| | ||||| || |||||| |||| ||||||||
Sbjct: 469 gatgtgagtggtgctttgatgaacacactcacagtgcagatgaggttaggtatgtttgat 528
Query: 361 ggcgagccatcaagtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacct 420
|| ||||||||| ||| |||||| || | ||||||||||| ||||| | | ||
Sbjct: 529 ggagagccatcagctcagaattatggccacttaggtccaagagacgtgtgtaaaccggct 588
Query: 421 caccaagagctagcccttgaagctgctagacaagggattgtgctcctaaagaacagtggt 480
|| ||||| || |||||||||||||| |||||||||||||||||||| ||||||| ||||
Sbjct: 589 catcaagaacttgcccttgaagctgcaagacaagggattgtgctccttaagaacaatggt 648
Query: 481 ccctctttgcctctctccactcgacgccatcgcaccctggctatcattgggcccaattct 540
|||||||||||||||||| | | || || |||||| ||||| |||| || ||||||||
Sbjct: 649 ccctctttgcctctctccccgcagcgtcaccgcaccgtggctgtcataggccccaattcc 708
Query: 541 aatgccactgtcacaatgataggaaactatgctggtattggttgtagatacacaagccct 600
||||||| ||| ||||| ||||||||||| ||||||| |||| |||| || ||||||
Sbjct: 709 gatgccacattcatgatgattggaaactatgcaggtattgcttgtggatataccagccct 768
Query: 601 ttagaaggaataggaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggct 660
||| |||||||||||| || || |||||||| || | || |||| ||| ||
Sbjct: 769 ttacaaggaataggaagatatgccaagactattcatcaaaagggctgtgatcatgcaact 828
Query: 661 tgcactgatgacaagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacg 720
|| |||||||||||||||| ||| ||||||| ||||||||||||| |||||||| ||
Sbjct: 829 tgtgctgatgacaagcaatttgggccagctctagatgcagctcgtcatgcagatgcaact 888
Query: 721 gttctagtgatgggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttg 780
||||| |||||||| |||||||||| ||||| |||||||| ||| ||| ||| |||
Sbjct: 889 gttcttgtgatggggttggaccagtctattgaagctgaaacaagggatagggttgggttg 948
Query: 781 cttcttcccgggcgtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggccca 840
||| | || |||| ||||||||||||||| |||||||||||||||||||| | ||| |||
Sbjct: 949 cttttgccagggcatcaacaagaccttgtttcaaaggtagcagctgcctcaaggggacca 1008
Query: 841 accattttggtcttaatgtctggtgg 866
|| ||||||||||| |||||||||||
Sbjct: 1009 actattttggtcttgatgtctggtgg 1034
>gnl|LJGI|TC76757 similar to UniRef100_A7Q0L3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 546
Score = 418 bits (211), Expect = e-116
Identities = 214/215 (99%)
Strand = Plus / Minus
Query: 1385 cgcgcaagcaactagtggcgtttgagaaagttcatattcctgctaaggctcagcggagag 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cgcgcaagcaactagtggcgtttgagaaagttcatattcctgctaaggctcagcggagag 487
Query: 1445 tgcgagttaacattcatgtttgcaagcttctgagtgtggttgataggtctggtataagga 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgcgagttaacattcatgtttgcaagcttctgagtgtggttgataggtctggtataagga 427
Query: 1505 gaatcccaatgggggaacacaggtttcaaattggtgatattgaacattctctgtcacttc 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaatcccaatgggggaacacaggtttcaaattggtgatattgaacattctctgtcacttc 367
Query: 1565 aagcaaaaacacttggagtcatcaaatcctgaaat 1599
|||| ||||||||||||||||||||||||||||||
Sbjct: 366 aagccaaaacacttggagtcatcaaatcctgaaat 332
>gnl|LJGI|TC72308 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 782
Score = 311 bits (157), Expect = 7e-84
Identities = 553/685 (80%)
Strand = Plus / Plus
Query: 125 ggtacattgtatcagactgtgactctgttggggtgttctacactagccaacattacacat 184
|||||||||| |||||||||||||| || || ||||| || | || ||||||||||||||
Sbjct: 98 ggtacattgtttcagactgtgactcagtgggagtgttttatagtaaccaacattacacat 157
Query: 185 caacaccagaagaagctgctgctgatgccattaaagcaggcttggatttggattgtgggc 244
|||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct: 158 caacaccagaagaagctgctgctgatgccattaaagcaggtttagatttagattgtggtc 217
Query: 245 ctttcttaggggcccatacacagaatgctgtcaagagaggcctgttaagtgaagctgatg 304
||||| |||| || || ||| | || || || | ||| ||||||| ||||| ||||
Sbjct: 218 ctttcctaggattgcacacgcaggacgcggtgaaaaaaggtttgttaagcgaagcagatg 277
Query: 305 tgaatgttgcattagcaaacacattgacagttcaaatgaggctagggatgtttgagggcg 364
||| || ||| || |||||| | ||||| || |||||| |||| |||||||| || |
Sbjct: 278 tgagtggtgctttgatgaacacactcacagtgcagatgaggttaggtatgtttgatggag 337
Query: 365 agccatcaagtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacctcacc 424
|||||||| ||| |||||| || | ||||||||||| ||||| | | |||| |
Sbjct: 338 agccatcagctcagaattatggccacttaggtccaagagacgtgtgtaaaccggctcatc 397
Query: 425 aagagctagcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccct 484
|||| || |||||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 398 aagaacttgcccttgaagctgcaagacaagggattgtgctccttaagaacaatggtccct 457
Query: 485 ctttgcctctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatg 544
|||||||||||||| | | || || |||||| ||||| |||| || |||||||| |||
Sbjct: 458 ctttgcctctctccccgcagcgtcaccgcaccgtggctgtcataggccccaattccgatg 517
Query: 545 ccactgtcacaatgataggaaactatgctggtattggttgtagatacacaagccctttag 604
|||| ||| ||||| ||||||||||| ||||||| |||| |||| || |||||||||
Sbjct: 518 ccacattcatgatgattggaaactatgcaggtattgcttgtggatataccagccctttac 577
Query: 605 aaggaataggaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggcttgca 664
|||||||||||| || || |||||||| || | || |||| ||| ||||
Sbjct: 578 aaggaataggaagatatgccaagactattcatcaaaagggctgtgatcatgcaacttgtg 637
Query: 665 ctgatgacaagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttc 724
|||||||||||||||| ||| ||||||| ||||||||||||| |||||||| || ||||
Sbjct: 638 ctgatgacaagcaatttgggccagctctagatgcagctcgtcatgcagatgcaactgttc 697
Query: 725 tagtgatgggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttc 784
| |||||||| |||||||||| ||||| |||||||| ||| ||| ||| ||||||
Sbjct: 698 ttgtgatggggttggaccagtctattgaagctgaaacaagggatagggttgggttgcttt 757
Query: 785 ttcccgggcgtcaacaagaccttgt 809
| || |||| |||||||||||||||
Sbjct: 758 tgccagggcatcaacaagaccttgt 782
>gnl|LJGI|TC64935 similar to UniRef100_A7Q0L3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 703
Score = 131 bits (66), Expect = 1e-29
Identities = 270/338 (79%)
Strand = Plus / Plus
Query: 1231 aacatttcaaacaaggcaattagagtgacacatgcacggtgtggcaagctttctgttagc 1290
|||||||||||||||||||||||||||||||| || |||||||||||||| || |
Sbjct: 108 aacatttcaaacaaggcaattagagtgacacacgcgcggtgtggcaagctctccatcgca 167
Query: 1291 cttcaagttgatgttaaaaatgctgggtccatagatggcactcacactttgttagtgttc 1350
|| || || | ||||| |||| || || | ||| ||||||||||| ||| ||||||||
Sbjct: 168 ctccacgtcaacgttaagaatgtgggatctagagacggcactcacacattgctagtgttc 227
Query: 1351 acaacaccacctagaggtaatggtcattgggcaccgcgcaagcaactagtggcgtttgag 1410
| | ||||| ||| || |||||||||| || ||||| || ||||||||||||
Sbjct: 228 tctgctccacccgatggtggtgctcattgggcagtgcagaagcagcttgtggcgtttgag 287
Query: 1411 aaagttcatattcctgctaaggctcagcggagagtgcgagttaacattcatgtttgcaag 1470
|| |||||| | ||||| ||| | |||| | |||| | | | ||||||||||||||||||
Sbjct: 288 aaggttcatgtccctgcaaagtcacagcagcgagtccaaatcaacattcatgtttgcaag 347
Query: 1471 cttctgagtgtggttgataggtctggtataaggagaatcccaatgggggaacacaggttt 1530
|| || ||||| || || ||||| || ||||||||||| || |||||||||||||| ||
Sbjct: 348 ctcctcagtgtagtggacaggtcagggataaggagaataccgatgggggaacacagtctt 407
Query: 1531 caaattggtgatattgaacattctctgtcacttcaagc 1568
|| ||||||||| || |||||||| | |||||||||||
Sbjct: 408 catattggtgatgttaaacattctgtttcacttcaagc 445
>gnl|LJGI|TC78248 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1769
Score = 56.0 bits (28), Expect = 7e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 1042 atgacaaacatggcaatgagaccaagccgacccacagggtacccaggaagaacctatcga 1101
||||||||||||| ||| |||||| || | | |||||||||||||||| ||||| ||
Sbjct: 897 atgacaaacatggacatgcgaccaaacccagcatcagggtacccaggaaggacctacaga 956
Query: 1102 ttctacaaaggtcctgtggtgtatccatttgg 1133
|||||||| || || ||||||| ||||||||
Sbjct: 957 ttctacaagggcccagtggtgttcccatttgg 988