Miyakogusa Predicted Gene
- Lj5g3v1600680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1600680.2 CUFF.55604.2
(1716 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV770828 similar to UniRef100_A7Q8M4 Cluster: Chromosom... 977 0.0
gnl|LJGI|TC69320 similar to UniRef100_A7Q8M4 Cluster: Chromosome... 533 e-150
gnl|LJGI|DC598577 similar to UniRef100_Q333M3 Cluster: Beta (1,4... 492 e-138
gnl|LJGI|TC60585 similar to UniRef100_Q333M3 Cluster: Beta (1,4)... 396 e-109
gnl|LJGI|TC72308 similar to UniRef100_A7Q8M4 Cluster: Chromosome... 319 3e-86
gnl|LJGI|TC76057 similar to UniRef100_Q333M3 Cluster: Beta (1,4)... 194 1e-48
gnl|LJGI|TC75574 homologue to UniRef100_Q6RXY3 Cluster: Beta xyl... 94 3e-18
>gnl|LJGI|AV770828 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 527
Score = 977 bits (493), Expect = 0.0
Identities = 519/527 (98%), Gaps = 3/527 (0%)
Strand = Plus / Plus
Query: 1090 agtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacctcaccaagagcta 1149
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 agtcaagcatatggcac---tggtccaagagatgtgtgcacccaacctcaccaagagcta 60
Query: 1150 gcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccctctttgcct 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccctctttgcct 120
Query: 1210 ctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatgccactgtc 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatgccactgtc 180
Query: 1270 acaatgataggaaactatgctggtattggttgtagatacacaagccctttagaaggaata 1329
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 181 acaatgataggaaactatgctggtattggttatagatacacaagcccttgagaaggaata 240
Query: 1330 ggaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggcttgcactgatgac 1389
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 241 ggaaagtacgcaaagactatccacgagctcgggtgtgcgaatgtggctggcactgatgac 300
Query: 1390 aagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttctagtgatg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttctagtgatg 360
Query: 1450 ggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttcttcccggg 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttcttcccggg 420
Query: 1510 cgtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggcccaaccattttggtc 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggcccaaccattttggtc 480
Query: 1570 ttaatgtctggtgggcctgtggatataacttttgcaaagaatgaccc 1616
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaatgtctggtgggcctgtggatataacttttgcaaagaatgaccc 527
>gnl|LJGI|TC69320 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1040
Score = 533 bits (269), Expect = e-150
Identities = 752/913 (82%)
Strand = Plus / Plus
Query: 671 aggtgagcaagcaggacatagaagacacgttcaatgtgccattcaggatgtgtgtgaagg 730
||||||| |||||||||| ||| || || || |||| |||||||||||||||||||| |
Sbjct: 122 aggtgagtaagcaggacaaagaggaaacatttgatgttccattcaggatgtgtgtgaaag 181
Query: 731 aaggtaatgtggcgagtgtgatgtgttcttataatcaagttaatggtgtccctacctgtg 790
|||| || || || ||||||||||||||||| |||||||| ||||| ||||| |||||||
Sbjct: 182 aaggcaaagtagcaagtgtgatgtgttcttacaatcaagtcaatggggtcccaacctgtg 241
Query: 791 cagacgccaacctcctcaagagaactgttcgtggccaatggggtcttaatgggtacattg 850
||||| |||||||||| |||||||| |||||||| |||||| |||| ||||||||||||
Sbjct: 242 cagaccccaacctcctaaagagaacagttcgtggacaatggcatcttgatgggtacattg 301
Query: 851 tatcagactgtgactctgttggggtgttctacactagccaacattacacatcaacaccag 910
| |||||||||||||| || || ||||| || | || |||||||||||||||||||||||
Sbjct: 302 tttcagactgtgactcagtgggagtgttttatagtaaccaacattacacatcaacaccag 361
Query: 911 aagaagctgctgctgatgccattaaagcaggcttggatttggattgtgggcctttcttag 970
||||||||||||||||||||||||||||||| || ||||| |||||||| |||||| |||
Sbjct: 362 aagaagctgctgctgatgccattaaagcaggtttagatttagattgtggtcctttcctag 421
Query: 971 gggcccatacacagaatgctgtcaagagaggcctgttaagtgaagctgatgtgaatgttg 1030
| || || ||| | || || || | ||| ||||||| ||||| ||||||| || ||
Sbjct: 422 gattgcacacgcaggacgcggtgaaaaaaggtttgttaagcgaagcagatgtgagtggtg 481
Query: 1031 cattagcaaacacattgacagttcaaatgaggctagggatgtttgatggcgagccatcaa 1090
| || |||||| | ||||| || |||||| |||| ||||||||||| |||||||||
Sbjct: 482 ctttgatgaacacactcacagtgcagatgaggttaggtatgtttgatggagagccatcag 541
Query: 1091 gtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacctcaccaagagctag 1150
||| |||||| || | ||||||||||| ||||| | | |||| ||||| || |
Sbjct: 542 ctcagaattatggccacttaggtccaagagacgtgtgtaaaccggctcatcaagaacttg 601
Query: 1151 cccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccctctttgcctc 1210
||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 602 cccttgaagctgcaagacaagggattgtgctccttaagaacaatggtccctctttgcctc 661
Query: 1211 tctccactcgacgccatcgcaccctggctatcattgggcccaattctaatgccactgtca 1270
||||| | | || || |||||| ||||| |||| || |||||||| ||||||| |||
Sbjct: 662 tctccccgcagcgtcaccgcaccgtggctgtcataggccccaattccgatgccacattca 721
Query: 1271 caatgataggaaactatgctggtattggttgtagatacacaagccctttagaaggaatag 1330
||||| ||||||||||| ||||||| |||| |||| || ||||||||| |||||||||
Sbjct: 722 tgatgattggaaactatgcaggtattgcttgtggatataccagccctttacaaggaatag 781
Query: 1331 gaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggcttgcactgatgaca 1390
||| || || |||||||| || | || |||| ||| |||| |||||||||
Sbjct: 782 gaagatatgccaagactattcatcaaaagggctgtgatcatgcaacttgtgctgatgaca 841
Query: 1391 agcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttctagtgatgg 1450
||||||| ||| ||||||| ||||||||||||| |||||||| || ||||| |||||||
Sbjct: 842 agcaatttgggccagctctagatgcagctcgtcatgcagatgcaactgttcttgtgatgg 901
Query: 1451 gcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttcttcccgggc 1510
| |||||||||| ||||| |||||||| ||| ||| ||| |||||| | || ||||
Sbjct: 902 ggttggaccagtctattgaagctgaaacaagggatagggttgggttgcttttgccagggc 961
Query: 1511 gtcaacaagaccttgtgtcaaaggtagcagctgcctctaagggcccaaccattttggtct 1570
||||||||||||||| |||||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 962 atcaacaagaccttgtttcaaaggtagcagctgcctcaaggggaccaactattttggtct 1021
Query: 1571 taatgtctggtgg 1583
| |||||||||||
Sbjct: 1022 tgatgtctggtgg 1034
>gnl|LJGI|DC598577 similar to UniRef100_Q333M3 Cluster: Beta (1,4)-xylosidase; n=1;
Populus tremula x Populus alba|Rep: Beta
(1,4)-xylosidase - Populus tremula x Populus alba,
partial (11%)
Length = 333
Score = 492 bits (248), Expect = e-138
Identities = 294/308 (95%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 1 atggattccatgtccttacccctcatcgccattctctttctcctcctcatttccggcagc 60
||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 27 atggattccctgtccttacccctcatccccattctctttctcctcctcatttcccgcagc 86
Query: 61 caggcacgtgagcctttcgcctgtgatccgaagaacacaaccacgacgaacttgccattt 120
|||||||||||||||||| ||||||| ||||||||| | ||||| || ||||||||||||
Sbjct: 87 caggcacgtgagcctttcccctgtgagccgaagaaccccaccaccaccaacttgccattt 146
Query: 121 tgccgggcatcgctggtaacaggagccagggttaatgacataattggaaggttgacacta 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 147 tgccgggcatccctggtaacaggagccagggttaatgacataattggaaggttgacccta 206
Query: 181 caagagaaggttaacttgctggtgaacaatgccgcggcggttcctaggcttggaatcaaa 240
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 207 caagagaaggttaacttgctggtgaaccatgccgccgcggttcctaggcttggaatcaaa 266
Query: 241 ggctatgagtggtggtcggaggcactacacggtgtttcaaatgtgggtccaggaaccaag 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 267 ggctatgagtggtggtcggaggcactacacggtgtttc-aatgtgggtccaggaaccaag 325
Query: 301 tttggtgg 308
||||||||
Sbjct: 326 tttggtgg 333
>gnl|LJGI|TC60585 similar to UniRef100_Q333M3 Cluster: Beta (1,4)-xylosidase; n=1;
Populus tremula x Populus alba|Rep: Beta
(1,4)-xylosidase - Populus tremula x Populus alba,
partial (30%)
Length = 753
Score = 396 bits (200), Expect = e-109
Identities = 443/524 (84%)
Strand = Plus / Plus
Query: 163 attggaaggttgacactacaagagaaggttaacttgctggtgaacaatgccgcggcggtt 222
|||||||||||||| || ||||| ||||||||| | || ||||||| |||| ||||||
Sbjct: 230 attggaaggttgacgctgcaagaaaaggttaacctactcgtgaacaccgccggtgcggtt 289
Query: 223 cctaggcttggaatcaaaggctatgagtggtggtcggaggcactacacggtgtttcaaat 282
|| |||| || ||||||||||||||||||||||||||||| || || || || ||||||
Sbjct: 290 ccccggctcgggatcaaaggctatgagtggtggtcggaggcgcttcatggagtctcaaat 349
Query: 283 gtgggtccaggaaccaagtttggtggccaattccctgctgcaactagcttccctcaagtc 342
||||| || ||||||||||||||||| || ||||||| ||| ||||||||||| ||||||
Sbjct: 350 gtgggccccggaaccaagtttggtggtcagttccctggtgctactagcttcccacaagtc 409
Query: 343 atcaccactgctgcttcattcaatgcttcattgtgggaagcaatcggacaggttgtttcg 402
|||||||| |||||||| ||||||| ||| |||||||| || || |||| |||||| |||
Sbjct: 410 atcaccaccgctgcttccttcaatgattctttgtgggaggccattggacgggttgtctcg 469
Query: 403 gatgaagcaagagcaatgtacaatggaggtatgggtgggctcacatattggagcccaaac 462
|| |||||||| ||||||||||||||||| | ||||| || |||||||||||||||
Sbjct: 470 gacgaagcaagggcaatgtacaatggaggagcagcagggctaacgtattggagcccaaac 529
Query: 463 gtcaacatattcagggatccacgatggggtcgtggacaggagactcccggtgaggaccca 522
|| ||||| ||||| || || ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 530 gtgaacattttcagagaccctagatggggccgtggacaggaaactcctggtgaggaccct 589
Query: 523 attctagccgggaagtatgcagctagttatgtaagaggactacagggaacagaccgtagt 582
| ||||| || | || || |||||||| || || || ||||||||||| || ||
Sbjct: 590 gtgctagctggtagatacgctgctagttacgtgagggggctacagggaactgatggtgac 649
Query: 583 cggttgaaggtggctgcttcttgcaagcacttcacagcttatgatcttgataattggaac 642
||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct: 650 cggttgaaggtggctgcttgctgcaaacactttacagcttatgatcttgataattggaac 709
Query: 643 ggtgtggatcgctttcacttcaatgcaaaggtgagcaagcagga 686
|||||||||||||| ||||| |||||| ||||||| ||||||||
Sbjct: 710 ggtgtggatcgcttccactttaatgcacaggtgagtaagcagga 753
>gnl|LJGI|TC72308 similar to UniRef100_A7Q8M4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 782
Score = 319 bits (161), Expect = 3e-86
Identities = 554/685 (80%)
Strand = Plus / Plus
Query: 842 ggtacattgtatcagactgtgactctgttggggtgttctacactagccaacattacacat 901
|||||||||| |||||||||||||| || || ||||| || | || ||||||||||||||
Sbjct: 98 ggtacattgtttcagactgtgactcagtgggagtgttttatagtaaccaacattacacat 157
Query: 902 caacaccagaagaagctgctgctgatgccattaaagcaggcttggatttggattgtgggc 961
|||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct: 158 caacaccagaagaagctgctgctgatgccattaaagcaggtttagatttagattgtggtc 217
Query: 962 ctttcttaggggcccatacacagaatgctgtcaagagaggcctgttaagtgaagctgatg 1021
||||| |||| || || ||| | || || || | ||| ||||||| ||||| ||||
Sbjct: 218 ctttcctaggattgcacacgcaggacgcggtgaaaaaaggtttgttaagcgaagcagatg 277
Query: 1022 tgaatgttgcattagcaaacacattgacagttcaaatgaggctagggatgtttgatggcg 1081
||| || ||| || |||||| | ||||| || |||||| |||| ||||||||||| |
Sbjct: 278 tgagtggtgctttgatgaacacactcacagtgcagatgaggttaggtatgtttgatggag 337
Query: 1082 agccatcaagtcaagcatatggcaaccttggtccaagagatgtgtgcacccaacctcacc 1141
|||||||| ||| |||||| || | ||||||||||| ||||| | | |||| |
Sbjct: 338 agccatcagctcagaattatggccacttaggtccaagagacgtgtgtaaaccggctcatc 397
Query: 1142 aagagctagcccttgaagctgctagacaagggattgtgctcctaaagaacagtggtccct 1201
|||| || |||||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 398 aagaacttgcccttgaagctgcaagacaagggattgtgctccttaagaacaatggtccct 457
Query: 1202 ctttgcctctctccactcgacgccatcgcaccctggctatcattgggcccaattctaatg 1261
|||||||||||||| | | || || |||||| ||||| |||| || |||||||| |||
Sbjct: 458 ctttgcctctctccccgcagcgtcaccgcaccgtggctgtcataggccccaattccgatg 517
Query: 1262 ccactgtcacaatgataggaaactatgctggtattggttgtagatacacaagccctttag 1321
|||| ||| ||||| ||||||||||| ||||||| |||| |||| || |||||||||
Sbjct: 518 ccacattcatgatgattggaaactatgcaggtattgcttgtggatataccagccctttac 577
Query: 1322 aaggaataggaaagtacgcaaagactatccacgagctcgggtgtgcaaatgtggcttgca 1381
|||||||||||| || || |||||||| || | || |||| ||| ||||
Sbjct: 578 aaggaataggaagatatgccaagactattcatcaaaagggctgtgatcatgcaacttgtg 637
Query: 1382 ctgatgacaagcaattcgggtcagctctgaatgcagctcgtcaagcagatgcgacggttc 1441
|||||||||||||||| ||| ||||||| ||||||||||||| |||||||| || ||||
Sbjct: 638 ctgatgacaagcaatttgggccagctctagatgcagctcgtcatgcagatgcaactgttc 697
Query: 1442 tagtgatgggcctggaccagtccattgaggctgaaaccgtggaccgggctggcttgcttc 1501
| |||||||| |||||||||| ||||| |||||||| ||| ||| ||| ||||||
Sbjct: 698 ttgtgatggggttggaccagtctattgaagctgaaacaagggatagggttgggttgcttt 757
Query: 1502 ttcccgggcgtcaacaagaccttgt 1526
| || |||| |||||||||||||||
Sbjct: 758 tgccagggcatcaacaagaccttgt 782
>gnl|LJGI|TC76057 similar to UniRef100_Q333M3 Cluster: Beta (1,4)-xylosidase; n=1;
Populus tremula x Populus alba|Rep: Beta
(1,4)-xylosidase - Populus tremula x Populus alba,
partial (17%)
Length = 1711
Score = 194 bits (98), Expect = 1e-48
Identities = 188/218 (86%)
Strand = Plus / Plus
Query: 163 attggaaggttgacactacaagagaaggttaacttgctggtgaacaatgccgcggcggtt 222
|||||||||||||| || ||||| ||||||||| | || ||||||| |||| ||||||
Sbjct: 230 attggaaggttgacgctgcaagaaaaggttaacctactcgtgaacaccgccggtgcggtt 289
Query: 223 cctaggcttggaatcaaaggctatgagtggtggtcggaggcactacacggtgtttcaaat 282
|| |||| || ||||||||||||||||||||||||||||| || || || || ||||||
Sbjct: 290 ccccggctcgggatcaaaggctatgagtggtggtcggaggcgcttcatggagtctcaaat 349
Query: 283 gtgggtccaggaaccaagtttggtggccaattccctgctgcaactagcttccctcaagtc 342
||||| || ||||||||||||||||| || ||||||| ||| ||||||||||| ||||||
Sbjct: 350 gtgggccccggaaccaagtttggtggtcagttccctggtgctactagcttcccacaagtc 409
Query: 343 atcaccactgctgcttcattcaatgcttcattgtggga 380
|||||||| |||||||| ||||||| ||| ||||||||
Sbjct: 410 atcaccaccgctgcttccttcaatgattctttgtggga 447
>gnl|LJGI|TC75574 homologue to UniRef100_Q6RXY3 Cluster: Beta xylosidase; n=1;
Fragaria x ananassa|Rep: Beta xylosidase - Fragaria
ananassa (Strawberry), partial (13%)
Length = 435
Score = 93.7 bits (47), Expect = 3e-18
Identities = 107/127 (84%)
Strand = Plus / Plus
Query: 239 aaggctatgagtggtggtcggaggcactacacggtgtttcaaatgtgggtccaggaacca 298
||||||||||||||||||||||||| | ||||| ||||| |||||||| ||||| || |
Sbjct: 309 aaggctatgagtggtggtcggaggcgttgcacggcgtttctaatgtggggccagggacta 368
Query: 299 agtttggtggccaattccctgctgcaactagcttccctcaagtcatcaccactgctgctt 358
|||| ||||| ||||| || || || ||||||||||| || |||||||| |||||||
Sbjct: 369 agttcggtggggccttccccgccgccaccagcttccctcaggttatcaccaccgctgctt 428
Query: 359 cattcaa 365
|||||||
Sbjct: 429 cattcaa 435