Miyakogusa Predicted Gene

Lj5g3v1598460.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1598460.1 Non Chatacterized Hit- tr|A9P0H0|A9P0H0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,44.21,0.000000000000007,CP12,Domain of unknown function CP12; no
description,Domain of unknown function CP12,CUFF.55589.1
         (397 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CN825189 similar to UniRef100_A7QEC8 Cluster: Chromosom...   779   0.0  
gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome...   127   6e-29

>gnl|LJGI|CN825189 similar to UniRef100_A7QEC8 Cluster: Chromosome chr1 scaffold_84,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_84, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (79%)
          Length = 580

 Score =  779 bits (393), Expect = 0.0
 Identities = 396/397 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaacaatagctggtgtgagcctttcaagccctggggtacttgctaaaggaccagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  atggcaacaatagctggtgtgagcctttcaagccctggggtacttgctaaaggaccagac 80

                                                                       
Query: 61  tcactgcaaaagcaaaagccacaagccatcaggttcccacagttgctcaaccaaaggtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  tcactgcaaaagcaaaagccacaagccatcaggttcccacagttgctcaaccaaaggtgt 140

                                                                       
Query: 121 cccgctatggtccggtccgatcggatggttagcttccaacccgtgcgcgcagcaccggag 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cccgctatggtccggtccggtcggatggttagcttccaacccgtgcgcgcagcaccggag 200

                                                                       
Query: 181 ggaatatcagggaaggtggaggagagcatcaagagtgctgaggagacatgctcggaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaatatcagggaaggtggaggagagcatcaagagtgctgaggagacatgctcggaaaat 260

                                                                       
Query: 241 gctaccagcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaccagcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcg 320

                                                                       
Query: 301 agccacgcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccacgcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaac 380

                                                
Query: 361 ccggagactgatgagtgccgtacctacgataactgat 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccggagactgatgagtgccgtacctacgataactgat 417


>gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (95%)
          Length = 2668

 Score =  127 bits (64), Expect = 6e-29
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                       
Query: 247 agcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcgagccac 306
           ||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 279 agcggcgagtgcgtggcggcgtgggatgaggtggaggagctgagcgcggcggcgagccat 338

                                                                       
Query: 307 gcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaacccggag 366
           || ||||||| |  ||| ||||| |||||||| ||| | ||||||||||| |||||||||
Sbjct: 339 gcaagggacaggaagaaggaaactgacccgctggaggattactgcaaggacaacccggag 398

                       
Query: 367 actgatgagtgc 378
           ||| | ||||||
Sbjct: 399 actaaggagtgc 410