Miyakogusa Predicted Gene
- Lj5g3v1598460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1598460.1 Non Chatacterized Hit- tr|A9P0H0|A9P0H0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,44.21,0.000000000000007,CP12,Domain of unknown function CP12; no
description,Domain of unknown function CP12,CUFF.55589.1
(397 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN825189 similar to UniRef100_A7QEC8 Cluster: Chromosom... 779 0.0
gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome... 127 6e-29
>gnl|LJGI|CN825189 similar to UniRef100_A7QEC8 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 580
Score = 779 bits (393), Expect = 0.0
Identities = 396/397 (99%)
Strand = Plus / Plus
Query: 1 atggcaacaatagctggtgtgagcctttcaagccctggggtacttgctaaaggaccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atggcaacaatagctggtgtgagcctttcaagccctggggtacttgctaaaggaccagac 80
Query: 61 tcactgcaaaagcaaaagccacaagccatcaggttcccacagttgctcaaccaaaggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tcactgcaaaagcaaaagccacaagccatcaggttcccacagttgctcaaccaaaggtgt 140
Query: 121 cccgctatggtccggtccgatcggatggttagcttccaacccgtgcgcgcagcaccggag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cccgctatggtccggtccggtcggatggttagcttccaacccgtgcgcgcagcaccggag 200
Query: 181 ggaatatcagggaaggtggaggagagcatcaagagtgctgaggagacatgctcggaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaatatcagggaaggtggaggagagcatcaagagtgctgaggagacatgctcggaaaat 260
Query: 241 gctaccagcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaccagcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcg 320
Query: 301 agccacgcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccacgcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaac 380
Query: 361 ccggagactgatgagtgccgtacctacgataactgat 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccggagactgatgagtgccgtacctacgataactgat 417
>gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 2668
Score = 127 bits (64), Expect = 6e-29
Identities = 115/132 (87%)
Strand = Plus / Plus
Query: 247 agcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcgagccac 306
||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agcggcgagtgcgtggcggcgtgggatgaggtggaggagctgagcgcggcggcgagccat 338
Query: 307 gcgagggacaagctgaaagaaaccgacccgcttgagaactactgcaaggagaacccggag 366
|| ||||||| | ||| ||||| |||||||| ||| | ||||||||||| |||||||||
Sbjct: 339 gcaagggacaggaagaaggaaactgacccgctggaggattactgcaaggacaacccggag 398
Query: 367 actgatgagtgc 378
||| | ||||||
Sbjct: 399 actaaggagtgc 410