Miyakogusa Predicted Gene
- Lj5g3v1598380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1598380.1 tr|I1JBF6|I1JBF6_SOYBN ATP-dependent Clp protease
proteolytic subunit OS=Glycine max GN=Gma.6743
PE=,97.11,0,CLP_protease,ClpP/TepA; CLP_PROTEASE_SER,ClpP, active
site; CLP_PROTEASE_HIS,ClpP, active site; ATP-,CUFF.55553.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57572 homologue to UniRef100_Q93YH0 Cluster: Clp prot... 1041 0.0
gnl|LJGI|TC71676 homologue to UniRef100_Q93YH0 Cluster: Clp prot... 238 3e-62
gnl|LJGI|AV778213 similar to UniRef100_Q93YH0 Cluster: Clp prote... 216 1e-55
>gnl|LJGI|TC57572 homologue to UniRef100_Q93YH0 Cluster: Clp protease 2 proteolytic
subunit precursor; n=1; Solanum lycopersicum|Rep: Clp
protease 2 proteolytic subunit precursor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(77%)
Length = 1290
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 1 atggcaaacatcatagttgctcagctcctttacctcgatgctgttgatcctaacaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atggcaaacatcatagttgctcagctcctttacctcgatgctgttgatcctaacaaggat 597
Query: 61 attgtcatgtatgtaaattctccaggaggatcggttacagctggtatggcaatattcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 attgtcatgtatgtaaattctccaggaggatcggttacagctggtatggcaatattcgat 657
Query: 121 acaatgaggcatatccgacctgatgtgtccactgtttgtgttggattagcggctagtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 acaatgaggcatatccgacctgatgtgtccactgtttgtgttggattagcggctagtatg 717
Query: 181 ggagcttttttgcttagcgcagggaccaaaggtaagagatacagcttgccaaactcaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ggagcttttttgcttagcgcagggaccaaaggtaagagatacagcttgccaaactcaagg 777
Query: 241 attatgatccatcaaccgcttggtggtgctcaaggagggcaaactgacatagatattcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 attatgatccatcaaccgcttggtggtgctcaaggagggcaaactgacatagatattcag 837
Query: 301 gcaaatgaaatgctgcatcataaggcaaacctgaatggatatctgtcctatcatactggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gcaaatgaaatgctgcatcataaggcaaacctgaatggatatctgtcctatcatactggc 897
Query: 361 caaagcttagagaagattaaccaggacacagaccgtgattttttcatgagcgcaaaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 caaagcttagagaagattaaccaggacacagaccgtgattttttcatgagcgcaaaagaa 957
Query: 421 gccaaagaatatggactcatagatggtgtcattatgaatcctctcaaagctctccagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 gccaaagaatatggactcatagatggtgtcattatgaatcctctcaaagctctccagcca 1017
Query: 481 ttgccggctgcagaggagggaaaagatcgggctgttgtttgaacc 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 ttgccggctgcagaggagggaaaagatcgggctgttgtttgaacc 1062
>gnl|LJGI|TC71676 homologue to UniRef100_Q93YH0 Cluster: Clp protease 2 proteolytic
subunit precursor; n=1; Solanum lycopersicum|Rep: Clp
protease 2 proteolytic subunit precursor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(25%)
Length = 701
Score = 238 bits (120), Expect = 3e-62
Identities = 123/124 (99%)
Strand = Plus / Plus
Query: 1 atggcaaacatcatagttgctcagctcctttacctcgatgctgttgatcctaacaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atggcaaacatcatagttgctcagctcctttacctcgatgctgttgatcctaacaaggat 637
Query: 61 attgtcatgtatgtaaattctccaggaggatcggttacagctggtatggcaatattcgat 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 attgtcatgtacgtaaattctccaggaggatcggttacagctggtatggcaatattcgat 697
Query: 121 acaa 124
||||
Sbjct: 698 acaa 701
>gnl|LJGI|AV778213 similar to UniRef100_Q93YH0 Cluster: Clp protease 2 proteolytic
subunit precursor; n=1; Solanum lycopersicum|Rep: Clp
protease 2 proteolytic subunit precursor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(11%)
Length = 600
Score = 216 bits (109), Expect = 1e-55
Identities = 129/133 (96%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 395 gtgattttttcatgagcgcaaaagaagccaaagaatatggactcatagatggtgtcatta 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgattttttcatgagcgcaaaagaagccaaagaatatggactcatagatggtgtcatta 541
Query: 455 tgaatcctctcaaagctctccagccattgccggctgcagaggagggaaaagat-cgggct 513
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 540 tgaatcctctctaagctctccagcccttgccggctgcagaggagggaaaagatacgggct 481
Query: 514 -gttgtttgaacc 525
||||||||||||
Sbjct: 480 ggttgtttgaacc 468