Miyakogusa Predicted Gene

Lj5g3v1598350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1598350.1 Non Chatacterized Hit- tr|I1JBF4|I1JBF4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,78.3,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; Protein kinase-like
(PK-like),Protein kin,CUFF.55543.1
         (1950 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349020 similar to UniRef100_A7P926 Cluster: Chromosom...    64   4e-09
gnl|LJGI|DC597341 similar to UniRef100_A7P926 Cluster: Chromosom...    64   4e-09
gnl|LJGI|TC60065 similar to UniRef100_A7PLB5 Cluster: Chromosome...    58   2e-07
gnl|LJGI|TC62982 homologue to UniRef100_A7Q0V8 Cluster: Chromoso...    56   9e-07
gnl|LJGI|TC70660 similar to UniRef100_A7PN67 Cluster: Chromosome...    54   3e-06
gnl|LJGI|TC63078 homologue to UniRef100_A7Q0V8 Cluster: Chromoso...    54   3e-06

>gnl|LJGI|FS349020 similar to UniRef100_A7P926 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (45%)
          Length = 532

 Score = 63.9 bits (32), Expect = 4e-09
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 1750 actcgtgttatgggaacatttgggtatgtagctcctgagtatgc 1793
            |||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 187  actcgtgtgatgggaacatttgggtatttggctcctgagtatgc 144


>gnl|LJGI|DC597341 similar to UniRef100_A7P926 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (27%)
          Length = 574

 Score = 63.9 bits (32), Expect = 4e-09
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 1750 actcgtgttatgggaacatttgggtatgtagctcctgagtatgc 1793
            |||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 494  actcgtgtgatgggaacatttgggtatttggctcctgagtatgc 537


>gnl|LJGI|TC60065 similar to UniRef100_A7PLB5 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (63%)
          Length = 1318

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 1759 atgggaacatttgggtatgtagctcctgagtatgcta 1795
            |||||||||||||| |||||||||||||| |||||||
Sbjct: 1130 atgggaacatttggttatgtagctcctgaatatgcta 1166


>gnl|LJGI|TC62982 homologue to UniRef100_A7Q0V8 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (87%)
          Length = 1667

 Score = 56.0 bits (28), Expect = 9e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 1819 agtgatgtttatagctatggggttgtcctgctggaactattgactggaaggaaacc 1874
            |||||||| || || | ||| |||||||| |||||||| |||||||||||||||||
Sbjct: 1012 agtgatgtgtacagttttggtgttgtccttctggaactcttgactggaaggaaacc 1067


>gnl|LJGI|TC70660 similar to UniRef100_A7PN67 Cluster: Chromosome chr1 scaffold_22,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_22, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 773

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1819 agtgatgtttatagctatggggttgtcctgctggaactattgactgg 1865
            |||||||||||||||| ||| || || |||||||||||||| |||||
Sbjct: 193  agtgatgtttatagctttggagtggtgctgctggaactattaactgg 239


>gnl|LJGI|TC63078 homologue to UniRef100_A7Q0V8 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (44%)
          Length = 1019

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1831 agctatggggttgtcctgctggaactattgactggaaggaaacctgt 1877
            |||| ||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 183  agctttggtgttgtccttctggaacttttgactggaaggaagcctgt 229