Miyakogusa Predicted Gene
- Lj5g3v1598340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1598340.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,62.84,0,PPR,Pentatricopeptide repeat; seg,NULL; PREDICTED: SIMILAR
TO LEUCINE-RICH PPR-MOTIF CONTAINING,NULL,CUFF.55548.1
(1455 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6... 728 0.0
gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 464 e-130
gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 192 4e-48
gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprote... 100 5e-20
>gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6A9.6 protein; n=1;
Arabidopsis thaliana|Rep: T6A9.6 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 661
Score = 728 bits (367), Expect = 0.0
Identities = 496/539 (92%)
Strand = Plus / Minus
Query: 849 aactggtaatcttgaaaaggtttatagtttatgggattccctcaagtcagtcactccagt 908
||||||||||||||| |||||||||| |||||| ||| ||||||||||||| |||||||
Sbjct: 655 aactggtaatcttgagaaggtttataagttatggtatttcctcaagtcagtctctccagt 596
Query: 909 gctcaatgtcagctatctttgcatgatttctgctcttaaaaggctaaatgatatggaggg 968
| |||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 595 gatcaatgaaagctatcttatcatgatttgtgctcttaaaaggcttaatgatatggaggg 536
Query: 969 cttaatcaggtgctttaaggagtgggaatctaggtatggacattgtgatttaaggttgat 1028
|||||||| |||||||||||||||||||||||||| | || || |||||| |||||| |
Sbjct: 535 cttaatcaagtgctttaaggagtgggaatctaggtgcgaacgttatgatttgaggttggt 476
Query: 1029 tagtgctgtaataagtgcttacttgagtcatgatatgagtgaagaagctgcattggtgtt 1088
|||| ||||||||||||||||||||||| | || ||| ||||||||||||||||||||||
Sbjct: 475 tagtactgtaataagtgcttacttgagtgaggacatgggtgaagaagctgcattggtgtt 416
Query: 1089 taaggacgctatcaagaagagtaaaggacctttctttaagattcgggaaatgttcatgat 1148
|||||| ||||| |||||||| ||||||||||||||||||||| |||||| ||||||| |
Sbjct: 415 taaggaggctatgaagaagagcaaaggacctttctttaagattagggaaaggttcatggt 356
Query: 1149 attcttcttggagaaatgtcaattggatggtgctgtgagccacttagaggcagcgctctc 1208
|||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 355 attcttcttggagaaacgtcaattggatggtgctgttagccacttagaggcggcgctttc 296
Query: 1209 ggaagtcgtgggtgatgaatggcgtcctacaccacgtgttttgagggcctttgtaaagta 1268
|||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||
Sbjct: 295 ggaagtcgtgggtgatgaatggcgtcctttcccacatgttgtgagggcctttgtaaagta 236
Query: 1269 ttataaagaagaaacagatcttgatggtgttgatgagttaagcaagattctcatgactca 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 235 ttataaagaagaaacagatcttgatggtgttgatgagttaagcaagattctcaagactca 176
Query: 1329 caactttgatgattcctggcttcagagttccattgcagcagctgagtcatctcctgaaa 1387
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 175 caactttgatgattcctggcttcagagttccattgcagcatctgagtcatctcctgaaa 117
>gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 597
Score = 464 bits (234), Expect = e-130
Identities = 449/519 (86%), Gaps = 5/519 (0%)
Strand = Plus / Plus
Query: 1 atgaatcttgtccgtataatttccggcggaagaaggcttctccgccacctgtgcacggcg 60
|||||||| |||||| ||||||||||| || |||||||||||||||| |||||||||| |
Sbjct: 76 atgaatctcgtccgtctaatttccggccgaggaaggcttctccgccagctgtgcacgggg 135
Query: 61 gttacggaggctgatcgtccggcgaaggggcgaagcctttatcaaaggttatcagagttg 120
| ||||||||| |||||||||||||| || | ||||||||||||||||||||||| |
Sbjct: 136 gctacggaggccaatcgtccggcgaagaagcaaggcctttatcaaaggttatcagagaag 195
Query: 121 gagaagaccggaatgagcgcgtcacagacgttggaccagtatatatcagagggcaaagtc 180
|| ||||||||| ||||||||||| |||||||| ||||||| || ||||||||| ||||
Sbjct: 196 gaaaagaccggattgagcgcgtcagagacgttgaaccagtacatgacagagggcagagtc 255
Query: 181 gccggaaagaaggagctcatgagtatcgtcaaggagctccggaagtatcgcagattccag 240
|||||||| | || |||||| ||||||||||||||||||| ||||||||||| ||||||
Sbjct: 256 gccggaaaaagcgaactcatgcgtatcgtcaaggagctccgtaagtatcgcaggttccag 315
Query: 241 gatgctcttcagataatgaaatggatggagagtaggg----tagagtctcccttggatta 296
||||||||| || ||||| | |||||||||| ||| || ||| ||| | ||
Sbjct: 316 gatgctcttgaggtaatggagtggatggagaagaggaattcta-agtttccgcggacata 374
Query: 297 taattatgcagtgcatttagatcttgtgtgcaaaaacgaaggggtggttgccgctgagaa 356
|||| |||||||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 375 taatcatgcagtgcatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgagag 434
Query: 357 ttacttcaatagtcttcctcctcttgccatgaacaagtacacatatggtgctcttttgaa 416
|||||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||
Sbjct: 435 ttactttaatagtcttcctcctcctgccatggacatgtacacatatggtactcttttgaa 494
Query: 417 ttgttattgcaaggaactaatggtaaataaggcattggctcattttgacaagatgaatga 476
|||||| || |||||||||||| |||||||||||| || |||||||||||||||||
Sbjct: 495 ttgttactgtcaggaactaatggcggataaggcattggatctgtttgacaagatgaatga 554
Query: 477 attgggttatgtcacttttttgagtttcaacaatctgat 515
||||||||||||||||| ||||| |||||||||||||||
Sbjct: 555 attgggttatgtcacttctttgaatttcaacaatctgat 593
>gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 745
Score = 192 bits (97), Expect = 4e-48
Identities = 286/349 (81%)
Strand = Plus / Plus
Query: 296 ataattatgcagtgcatttagatcttgtgtgcaaaaacgaaggggtggttgccgctgaga 355
|||||||||||||| ||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 321 ataattatgcagtgtatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgaga 380
Query: 356 attacttcaatagtcttcctcctcttgccatgaacaagtacacatatggtgctcttttga 415
|| ||| | |||||| |||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 381 gtttctttgagggtcttcttccttgtgccaagaacaagtacacatatggtgcccttttga 440
Query: 416 attgttattgcaaggaactaatggtaaataaggcattggctcattttgacaagatgaatg 475
|||||||||||||||| ||||||| | |||||||||| |||| ||| ||||||||| |||
Sbjct: 441 attgttattgcaaggagctaatggcagataaggcattagctcttttcgacaagatggatg 500
Query: 476 aattgggttatgtcacttttttgagtttcaacaatctgatcggtatgtacatgaggttgg 535
| || | | ||||||| |||| |||||||||||| || | ||||| |||||| | |
Sbjct: 501 agtttcgctttgtcactagtttggctttcaacaatctcatgagcatgtatatgaggctcg 560
Query: 536 gtcaaccactgaaagtgcatgagttggtgcatgacatgaaggagaggaacattcccatga 595
||| ||| ||| |||| || |||| ||||| |||| | |||||| |||||||| |
Sbjct: 561 gtcgacccgagaaggtgccgcagctggtccatgatatgaggcagaggagaattcccatca 620
Query: 596 gtgcattcgcatatcatgcgtggatgaatagctacgccgctttgaatga 644
|||| ||| | || |||| ||||||||||||| ||| |||| ||||||
Sbjct: 621 gtgcgttcacgtaccatgtctggatgaatagctgcgcggcttcgaatga 669
>gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprotein; n=3;
Rhinovirus|Rep: Polyprotein - Human rhinovirus 7, partial
(0%)
Length = 654
Score = 99.6 bits (50), Expect = 5e-20
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 1111 aaaggacctttctttaagattcgggaaatgttcatgatattcttcttggagaaatgtcaa 1170
||||||||||||||||||||||| |||||||||||||| || | |||| ||||| ||||
Sbjct: 552 aaaggacctttctttaagattcgagaaatgttcatgatgttttacttgaagaaagatcaa 493
Query: 1171 ttggatggtgctgtgagccacttagaggcagcgc 1204
||||||||||| ||||||||||| |||| ||||
Sbjct: 492 ttggatggtgcattgagccacttacaggcggcgc 459