Miyakogusa Predicted Gene
- Lj5g3v1598320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1598320.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,59.45,0,PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repeat; TPR_7,Tetratricopeptide repeat; PPR: p,gene.g61970.t1.1
(1551 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6... 1187 0.0
gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 1035 0.0
gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 184 1e-45
gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprote... 94 3e-18
>gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6A9.6 protein; n=1;
Arabidopsis thaliana|Rep: T6A9.6 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 661
Score = 1187 bits (599), Expect = 0.0
Identities = 605/607 (99%)
Strand = Plus / Minus
Query: 945 tgcaaaaactggtaatcttgagaaggtttataagttatggtatttcctcaagtcagtctc 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcaaaaactggtaatcttgagaaggtttataagttatggtatttcctcaagtcagtctc 602
Query: 1005 tccagggatcaatgaaagctatcttatcatgatttgtgctcttaaaaggcttaatgatat 1064
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccagtgatcaatgaaagctatcttatcatgatttgtgctcttaaaaggcttaatgatat 542
Query: 1065 gaagggcttaatcaagtgctttaaggagtgggaatctaggtgcgaacgttatgatttgag 1124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggagggcttaatcaagtgctttaaggagtgggaatctaggtgcgaacgttatgatttgag 482
Query: 1125 gttggttagtactgtaataagtgcttacttgagtgaggacatgggtgaagaagctgcatt 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttggttagtactgtaataagtgcttacttgagtgaggacatgggtgaagaagctgcatt 422
Query: 1185 ggtgtttaaggaggctatgaagaagagcaaaggacctttctttaagattagggaaaggtt 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtgtttaaggaggctatgaagaagagcaaaggacctttctttaagattagggaaaggtt 362
Query: 1245 catggtattcttcttggagaaacgtcaattggatggtgctgttagccacttagaggcggc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catggtattcttcttggagaaacgtcaattggatggtgctgttagccacttagaggcggc 302
Query: 1305 gctttcggaagtcgtgggtgatgaatggcgtcctttcccacatgttgtgagggcctttgt 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctttcggaagtcgtgggtgatgaatggcgtcctttcccacatgttgtgagggcctttgt 242
Query: 1365 aaagtattataaagaagaaacagatcttgatggtgttgatgagttaagcaagattctcaa 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagtattataaagaagaaacagatcttgatggtgttgatgagttaagcaagattctcaa 182
Query: 1425 gactcacaactttgatgattcctggcttcagagttccattgcagcatctgagtcatctcc 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactcacaactttgatgattcctggcttcagagttccattgcagcatctgagtcatctcc 122
Query: 1485 tgaaaatgaagattctattgtcaatggtgcacttcagaacttgcaagatgatgttcactg 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaaatgaagattctattgtcaatggtgcacttcagaacttgcaagatgatgttcactg 62
Query: 1545 tgaataa 1551
|||||||
Sbjct: 61 tgaataa 55
>gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 597
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 1 atgaatctcgtccgtctaatttccggccgaggaaggcttctccgccagctgtgcacgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgaatctcgtccgtctaatttccggccgaggaaggcttctccgccagctgtgcacgggg 135
Query: 61 gctacggaggccaatcgtccggcgaagaagcaaggcctttatcaaaggttatcagagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gctacggaggccaatcgtccggcgaagaagcaaggcctttatcaaaggttatcagagaag 195
Query: 121 gaaaagaccggattgagcgcgtcagagacgttgaaccagtacatgacagagggcagagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaaaagaccggattgagcgcgtcagagacgttgaaccagtacatgacagagggcagagtc 255
Query: 181 gccggaaaaagcgaactcatgcgtatcgtcaaggagctccgtaagtatcgcaggttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gccggaaaaagcgaactcatgcgtatcgtcaaggagctccgtaagtatcgcaggttccag 315
Query: 241 gatgctcttgaggtaatggagtggatggagaagaggaattctaagtttccgcggacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gatgctcttgaggtaatggagtggatggagaagaggaattctaagtttccgcggacatat 375
Query: 301 aatcatgcagtgcatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatcatgcagtgcatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgagagt 435
Query: 361 tactttaatagtcttcctcctcctgccatggacatgtacacatatggtactcttttgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tactttaatagtcttcctcctcctgccatggacatgtacacatatggtactcttttgaat 495
Query: 421 tgttactgtcaggaactaatggcggataaggcattggatctgtttgacaagatgaatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgttactgtcaggaactaatggcggataaggcattggatctgtttgacaagatgaatgaa 555
Query: 481 ttgggttatgtcacttctttgaatttcaacaatctgatgact 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgggttatgtcacttctttgaatttcaacaatctgatgact 597
>gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 745
Score = 184 bits (93), Expect = 1e-45
Identities = 285/349 (81%)
Strand = Plus / Plus
Query: 299 ataatcatgcagtgcatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgaga 358
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataattatgcagtgtatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgaga 380
Query: 359 gttactttaatagtcttcctcctcctgccatggacatgtacacatatggtactcttttga 418
||| |||| | |||||| |||| ||||| | ||| ||||||||||||| | |||||||
Sbjct: 381 gtttctttgagggtcttcttccttgtgccaagaacaagtacacatatggtgcccttttga 440
Query: 419 attgttactgtcaggaactaatggcggataaggcattggatctgtttgacaagatgaatg 478
||||||| || |||| |||||||| ||||||||||| | ||| || ||||||||| |||
Sbjct: 441 attgttattgcaaggagctaatggcagataaggcattagctcttttcgacaagatggatg 500
Query: 479 aattgggttatgtcacttctttgaatttcaacaatctgatgactctgttcatgaagttgg 538
| || | | ||||||| |||| |||||||||||| |||| ||| |||| | | |
Sbjct: 501 agtttcgctttgtcactagtttggctttcaacaatctcatgagcatgtatatgaggctcg 560
Query: 539 gtcagccactgaaagtgcatcagctggtggatgagatgaagcagaggaacattcccatga 598
||| || ||| |||| |||||||| |||| |||| |||||||| |||||||| |
Sbjct: 561 gtcgacccgagaaggtgccgcagctggtccatgatatgaggcagaggagaattcccatca 620
Query: 599 gtgcattcacgtatcatgcgtggatgaatagctacgccgctttgaatga 647
|||| |||||||| |||| ||||||||||||| ||| |||| ||||||
Sbjct: 621 gtgcgttcacgtaccatgtctggatgaatagctgcgcggcttcgaatga 669
>gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprotein; n=3;
Rhinovirus|Rep: Polyprotein - Human rhinovirus 7, partial
(0%)
Length = 654
Score = 93.7 bits (47), Expect = 3e-18
Identities = 164/203 (80%)
Strand = Plus / Minus
Query: 1113 ttatgatttgaggttggttagtactgtaataagtgcttacttgagtgaggacatgggtga 1172
||||||| | ||| |||||||| || | ||| |||||||||||| | ||||||| |||
Sbjct: 652 ttatgatataaggatggttagtgttgcagtaaatgcttacttgagacatgacatggatga 593
Query: 1173 agaagctgcattggtgtttaaggaggctatgaagaagagcaaaggacctttctttaagat 1232
|||||||| || || || ||| ||||| || || | ||||||||||||||||||||||
Sbjct: 592 agaagctgaatctgttttaaagagggctacgatgaggtgcaaaggacctttctttaagat 533
Query: 1233 tagggaaaggttcatggtattcttcttggagaaacgtcaattggatggtgctgttagcca 1292
| | |||| ||||||| | || | |||| ||||| ||||||||||||||| | |||||
Sbjct: 532 tcgagaaatgttcatgatgttttacttgaagaaagatcaattggatggtgcattgagcca 473
Query: 1293 cttagaggcggcgctttcggaag 1315
|||| ||||||||| ||| ||||
Sbjct: 472 cttacaggcggcgcattcagaag 450