Miyakogusa Predicted Gene
- Lj5g3v1598300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1598300.1 Non Chatacterized Hit- tr|I1L7N5|I1L7N5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26438
PE,66.74,0,PREDICTED: SIMILAR TO LEUCINE-RICH PPR-MOTIF
CONTAINING,NULL; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.55545.1
(1458 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 1350 0.0
gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprote... 844 0.0
gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Ch... 170 2e-41
gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6... 94 3e-18
>gnl|LJGI|FS327158 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 745
Score = 1350 bits (681), Expect = 0.0
Identities = 681/681 (100%)
Strand = Plus / Plus
Query: 64 ctccggcggttgtgcacggcggccaccgggtatgagcgtccggcagagaagccaaacctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ctccggcggttgtgcacggcggccaccgggtatgagcgtccggcagagaagccaaacctc 124
Query: 124 tatcgacagttatccgcgctggaaaagaccggaggtagtgtctcgcagattctgaaccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tatcgacagttatccgcgctggaaaagaccggaggtagtgtctcgcagattctgaaccag 184
Query: 184 tatgtaatgcaaggcaaagccatcagaaaatcggtgctggagaattgcatcagggagcta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tatgtaatgcaaggcaaagccatcagaaaatcggtgctggagaattgcatcagggagcta 244
Query: 244 cgcaagtatcgcaaattccaacacgcactagagataatggaatggatggagatgaggaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cgcaagtatcgcaaattccaacacgcactagagataatggaatggatggagatgaggaaa 304
Query: 304 gtgaatttttcatgggataattatgcagtgtatttagatcttgtgtgcaaaaccaaaggg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtgaatttttcatgggataattatgcagtgtatttagatcttgtgtgcaaaaccaaaggg 364
Query: 364 gtggttgcagctgagagtttctttgagggtcttcttccttgtgccaagaacaagtacaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtggttgcagctgagagtttctttgagggtcttcttccttgtgccaagaacaagtacaca 424
Query: 424 tatggtgcccttttgaattgttattgcaaggagctaatggcagataaggcattagctctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatggtgcccttttgaattgttattgcaaggagctaatggcagataaggcattagctctt 484
Query: 484 ttcgacaagatggatgagtttcgctttgtcactagtttggctttcaacaatctcatgagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttcgacaagatggatgagtttcgctttgtcactagtttggctttcaacaatctcatgagc 544
Query: 544 atgtatatgaggctcggtcgacccgagaaggtgccgcagctggtccatgatatgaggcag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atgtatatgaggctcggtcgacccgagaaggtgccgcagctggtccatgatatgaggcag 604
Query: 604 aggagaattcccatcagtgcgttcacgtaccatgtctggatgaatagctgcgcggcttcg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aggagaattcccatcagtgcgttcacgtaccatgtctggatgaatagctgcgcggcttcg 664
Query: 664 aatgatcttaacgaggccgaaaggatctatggggagatgagaagagtagatgggaatatg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aatgatcttaacgaggccgaaaggatctatggggagatgagaagagtagatgggaatatg 724
Query: 724 atcgattggagaacatatagc 744
|||||||||||||||||||||
Sbjct: 725 atcgattggagaacatatagc 745
Score = 123 bits (62), Expect = 3e-27
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 atgaattacttccgtcaaatctccggcggaggaaggctgctccggcggttgtgcacggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 atgaattacttccgtcaaatctccggcggaggaaggctgctccggcggttgtgcacggcg 85
Query: 61 gc 62
||
Sbjct: 86 gc 87
>gnl|LJGI|FS353485 similar to UniRef100_A5GZF2 Cluster: Polyprotein; n=3;
Rhinovirus|Rep: Polyprotein - Human rhinovirus 7, partial
(0%)
Length = 654
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Minus
Query: 1033 acttatgatataaggatggttagtgttgcagtaaatgcttacttgagacatgacatggat 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 acttatgatataaggatggttagtgttgcagtaaatgcttacttgagacatgacatggat 595
Query: 1093 gaagaagctgaatctgttttaaagagggctacgatgaggtgcaaaggacctttctttaag 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaagaagctgaatctgttttaaagagggctacgatgaggtgcaaaggacctttctttaag 535
Query: 1153 attcgagaaatgttcatgatgttttacttgaagaaagatcaattggatggtgcattgagc 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 attcgagaaatgttcatgatgttttacttgaagaaagatcaattggatggtgcattgagc 475
Query: 1213 cacttacaggcggcgcattcagaagctaccatatggcgtccttcaccagaagttgtaggt 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cacttacaggcggcgcattcagaagctaccatatggcgtccttcaccagaagttgtaggt 415
Query: 1273 gcttttctaaaatattatgatgaaaaaacggatcttgatggtgttgatgagttgtgcaag 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gcttttctaaaatattatgatgaaaaaacggatcttgatggtgttgatgagttgtgcaag 355
Query: 1333 attctcgatactaatgatgatgattcctgtcttaaaacttgtgatgctgcatccgagtcg 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 attctcgatactaatgatgatgattcctgtcttaaaacttgtgatgctgcatccgagtcg 295
Query: 1393 tctcctgaaattgatccaatattgaaggaagattcttatgtcaaccatgcacaagggaac 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tctcctgaaattgatccaatattgaaggaagattcttatgtcaaccatgcacaagggaac 235
Query: 1453 ttgtga 1458
||||||
Sbjct: 234 ttgtga 229
>gnl|LJGI|FS327319 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 597
Score = 170 bits (86), Expect = 2e-41
Identities = 188/222 (84%)
Strand = Plus / Plus
Query: 320 ataattatgcagtgtatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgaga 379
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ataatcatgcagtgcatttagatcttgtgtgcaaaaccaaaggggtggttgcagctgaga 433
Query: 380 gtttctttgagggtcttcttccttgtgccaagaacaagtacacatatggtgcccttttga 439
||| |||| | |||||| |||| ||||| | ||| ||||||||||||| | |||||||
Sbjct: 434 gttactttaatagtcttcctcctcctgccatggacatgtacacatatggtactcttttga 493
Query: 440 attgttattgcaaggagctaatggcagataaggcattagctcttttcgacaagatggatg 499
||||||| || |||| |||||||| ||||||||||| | ||| || ||||||||| |||
Sbjct: 494 attgttactgtcaggaactaatggcggataaggcattggatctgtttgacaagatgaatg 553
Query: 500 agtttcgctttgtcactagtttggctttcaacaatctcatga 541
| || | | ||||||| |||| |||||||||||| ||||
Sbjct: 554 aattgggttatgtcacttctttgaatttcaacaatctgatga 595
>gnl|LJGI|FS353651 weakly similar to UniRef100_Q9FZ24 Cluster: T6A9.6 protein; n=1;
Arabidopsis thaliana|Rep: T6A9.6 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 661
Score = 93.7 bits (47), Expect = 3e-18
Identities = 164/203 (80%)
Strand = Plus / Minus
Query: 1035 ttatgatataaggatggttagtgttgcagtaaatgcttacttgagacatgacatggatga 1094
||||||| | ||| |||||||| || | ||| |||||||||||| | ||||||| |||
Sbjct: 493 ttatgatttgaggttggttagtactgtaataagtgcttacttgagtgaggacatgggtga 434
Query: 1095 agaagctgaatctgttttaaagagggctacgatgaggtgcaaaggacctttctttaagat 1154
|||||||| || || || ||| ||||| || || | ||||||||||||||||||||||
Sbjct: 433 agaagctgcattggtgtttaaggaggctatgaagaagagcaaaggacctttctttaagat 374
Query: 1155 tcgagaaatgttcatgatgttttacttgaagaaagatcaattggatggtgcattgagcca 1214
| | |||| ||||||| | || | |||| ||||| ||||||||||||||| | |||||
Sbjct: 373 tagggaaaggttcatggtattcttcttggagaaacgtcaattggatggtgctgttagcca 314
Query: 1215 cttacaggcggcgcattcagaag 1237
|||| ||||||||| ||| ||||
Sbjct: 313 cttagaggcggcgctttcggaag 291