Miyakogusa Predicted Gene
- Lj5g3v1537640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1537640.1 tr|C3KGZ0|C3KGZ0_ANOFI C9orf78 OS=Anoplopoma
fimbria GN=CI078 PE=2 SV=1,31.17,7e-19,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,Hepatocellular carcinoma-associated antigen 59;
Hep_59,He,CUFF.55514.1
(870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60296 similar to UniRef100_A7Q0W5 Cluster: Chromosome... 1606 0.0
gnl|LJGI|DC594296 similar to UniRef100_A7Q0W5 Cluster: Chromosom... 151 9e-36
gnl|LJGI|TC71696 similar to UniRef100_A7QJ75 Cluster: Chromosome... 82 7e-15
>gnl|LJGI|TC60296 similar to UniRef100_A7Q0W5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1150
Score = 1606 bits (810), Expect = 0.0
Identities = 857/870 (98%), Gaps = 5/870 (0%)
Strand = Plus / Plus
Query: 1 atggaagattcgaaacagcaacgaaagaagaactacagaaagagaagtgctccagttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atggaagattcgaaacagcaacgaaagaagaactacagaaagagaagtgctccagttgaa 74
Query: 61 caagatcaactcccccaatctcaagacaacaacaatgaatccgacgacgaacgagaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 caagatcaactcccccaatctcaagacaacaacaatgaatccgacgacgaacgagaaaga 134
Query: 121 agaatggcattggaggaaatcaagctcctccagaagcagagggaaaggaaatcaggtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 agaatggcattggaggaaatcaagctcctccagaagcagagggaaaggaaatcaggtatt 194
Query: 181 gcagcaaaccctagtttgcaatctcaggctgtagtcactgccggctcagctgctaaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gcagcaaaccctagtttgcaatctcaggctgtagtcactgccggctcagctgctaaaccc 254
Query: 241 gccgagaagaatgacggtgatggcggcgacaaggatgaccttgttcttcaggacactttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gccgagaagaatgacggtgatggcggcgacaaggatgaccttgttcttcaggacactttt 314
Query: 301 gctcaagagactgctgtaatggatgaagaccccaatatggttaagtatgttgagcaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gctcaagagactgctgtaatggatgaagaccccaatatggttaagtatgttgagcaggaa 374
Query: 361 ttagcaaagaaaaggggtaggaagattgatgaagctgatcaaattgagaatgagttgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttagcaaagaaaaggggtaggaagattgatgaagctgatcaaattgagaatgagttgaaa 434
Query: 421 cgcgccgaagatgaactttataaaatccctgagcatcttaaggtaaaaaagcgaaattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cgcgccgaagatgaactttataaaatccctgagcatcttaaggtaaaaaagcgaaattca 494
Query: 481 gaagaaagctctactcaatggactactggtattgctgagattcagctcccaattgaatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaagaaagctctactcaatggactactggtattgctgagattcagctcccaattgaatat 554
Query: 541 aaattgaaaaatattgaagaaacagaggctgcnnnnnnncttctacaggaaaagaggctt 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 555 aaattgaaaaatattgaagaaacagaggctgcaaaaaaacttctacaggaaaagaggctt 614
Query: 601 atgggtcggacaaaaccagaagtcagtagcattccatcgagttacagcgctgattatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 atgggtcggacaaaaccagaagtcagtagcattccatcgagttacagcgctgattatttc 674
Query: 661 cagcgtggcagggattatgctgaaaagcttagaagagaacatccagagttgtacaaggat 720
|||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 675 cagcgtggcagg--atatgctg-aaagcttag-agag-acatccagagttgtacaaggat 729
Query: 721 agaagtcttcaggatgatagttctggatccaaacaaaatgattccagcactgatgctgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 agaagtcttcaggatgatagttctggatccaaacaaaatgattccagcactgatgctgct 789
Query: 781 ggagcagtgcagaggcaggctgccacagatgaattcatgttagagcgtttcaggaaacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggagcagtgcagaggcaggctgccacagatgaattcatgttagagcgtttcaggaaacga 849
Query: 841 gaacgtcaccgtgtaatgcggagatagcat 870
||||||||||||||||||||||||||||||
Sbjct: 850 gaacgtcaccgtgtaatgcggagatagcat 879
>gnl|LJGI|DC594296 similar to UniRef100_A7Q0W5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 593
Score = 151 bits (76), Expect = 9e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 461 aggtaaaaaagcgaaattcagaagaaagctctactcaatggactactggtattgctgaga 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aggtaaaaaagcgaaattcagaagaaagctctactcaatggactactggtattgctgaga 208
Query: 521 ttcagctcccaattga 536
||||||||||||||||
Sbjct: 209 ttcagctcccaattga 224
>gnl|LJGI|TC71696 similar to UniRef100_A7QJ75 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 766
Score = 81.8 bits (41), Expect = 7e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 460 aaggtaaaaaagcgaaattcagaagaaagctctactcaatggactactggtattgctgag 519
||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||
Sbjct: 466 aaggtaaaaaaaagaaattcagaagaaagctctactcaatgaactactgatatttctgag 525
Query: 520 attca 524
||||
Sbjct: 526 gttca 530