Miyakogusa Predicted Gene

Lj5g3v1536600.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1536600.1 Non Chatacterized Hit- tr|D7LFX0|D7LFX0_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,45.6,3e-19,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_27323_length_695_cov_7.166906.path1.1
         (561 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP033386 similar to UniRef100_A7Q0X9 Cluster: Chromosom...   105   3e-22
gnl|LJGI|TC61261 similar to UniRef100_A7Q0X9 Cluster: Chromosome...    84   1e-15

>gnl|LJGI|BP033386 similar to UniRef100_A7Q0X9 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (61%)
          Length = 498

 Score =  105 bits (53), Expect = 3e-22
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                       
Query: 409 tccaattccacacttgacactagcagtggtggttcttcacccatcaccaattggcgcatc 468
           ||||||||||| ||||||||||| ||||||||   |||||||||| |||||||||| |||
Sbjct: 310 tccaattccactcttgacactagtagtggtggcaattcacccatctccaattggcgtatc 251

                                                                
Query: 469 tctagtcctggtgatgatccaaaagatgtgaaggctcggctaaaaatgtgggc 521
           || ||||| ||||||||||||   |||||||||||| |||| ||| |||||||
Sbjct: 250 tcgagtcccggtgatgatccacgtgatgtgaaggctaggctcaaagtgtgggc 198



 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 331 atggatttggaggaagtgaaggcttgtaaagatcttggctttgaattgga 380
           |||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 400 atggatttggaggaagtgaaggcttgtagagatcttgggtttgaattgga 351


>gnl|LJGI|TC61261 similar to UniRef100_A7Q0X9 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 718

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 331 atggatttggaggaagtgaaggcttgtaaagatcttggctttgaattgga 380
           |||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 290 atggatttggaggaagtgaaggcttgtagagatcttgggtttgaattgga 339



 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 409 tccaattccacacttgacactagcagtggtggttcttcacccatcaccaattggcgcatc 468
           ||||||||||| ||||||||||| ||||||||   |||||||||| |||||||||| |||
Sbjct: 380 tccaattccactcttgacactagtagtggtggcaattcacccatctccaattggcgtatc 439

                   
Query: 469 tctagtcc 476
           || |||||
Sbjct: 440 tcgagtcc 447