Miyakogusa Predicted Gene
- Lj5g3v1533550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1533550.1 Non Chatacterized Hit- tr|I1NES2|I1NES2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,75.16,0,HELICASE
CONSERVED C-TERMINAL DOMAIN, PUTATIVE (FRAGMENT),NULL; FAMILY NOT
NAMED,NULL; P-loop contai,CUFF.55481.1
(2274 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, ... 2020 0.0
gnl|LJGI|TC57866 similar to UniRef100_Q8L7S8 Cluster: DEAD-box A... 1473 0.0
gnl|LJGI|TC81916 similar to UniRef100_Q2HUZ8 Cluster: Helicase, ... 161 2e-38
>gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, C-terminal; Zinc
finger, CCHC-type; GUCT; n=1; Medicago truncatula|Rep:
Helicase, C-terminal; Zinc finger, CCHC-type; GUCT -
Medicago truncatula (Barrel medic), partial (42%)
Length = 1356
Score = 2020 bits (1019), Expect = 0.0
Identities = 1036/1044 (99%)
Strand = Plus / Plus
Query: 1231 cgtggacttgatattcctaatgttgatttggttatacattatgaacttcccaatgatcct 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtggacttgatattcctaatgttgatttggttatacattatgaacttcccaatgatcct 60
Query: 1291 gagacttttgtacatcgctctggtcgtaccggtcgtgcaggaaaagagggtactgccatt 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagacttttgtacatcgctctggtcgtaccggtcgtgcaggaaaagagggtactgccatt 120
Query: 1351 ctgatgtataccagtaaccagaggagaactgttagatcccttgagcatgatgtaggctgc 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgatgtataccagtaaccagaggagaactgttagatcccttgagcatgatgtaggctgc 180
Query: 1411 aaatttgaatttgttagtccaccagctacgcaggagattttggaatcatctgccgagcaa 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatttgaatttgttagtccaccagctacgcaggagattttggaatcatctgccgagcaa 240
Query: 1471 gttgttgctgcacttagtagagttcatcctgaatctgttgaatttttcaccgcaactgca 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgttgctgcacttagtagagttcatcctgaatctgttgaatttttcaccgcaactgca 300
Query: 1531 caaaaactagttgaggaacgaggaacaagtgtccttgcagctgcactagcacaactgagt 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaaaactagttgaggaacgaggaacaagtgtccttgcagctgcactagcacaactgagt 360
Query: 1591 gggttctctcgacctccatcatcccggtctcttatcaatcaggaacagggatgcattaca 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggttctctcgacctccatcatcccggtctcttatcaatcaggaacagggatgcattaca 420
Query: 1651 ttacaactaactcgagatctagatgctcttcatggaaaatatctttctgctagatcagtc 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttacaactaactcgagatctagatgctcttcatggaaaatatctttctgctagatcagtc 480
Query: 1711 actgggtttctttctgatgtttattctccagctgctgatgaagttggaaaaatacattta 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgggtttctttctgatgtttattctccagctgctgatgaagttggaaaaatacattta 540
Query: 1771 attgcagatgaaagggttcaaggagctgtttttgatcttccggaggatatttctagagag 1830
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 541 attgcagatgaaagggttcaaggagctgtttttgatcttccggaggatattgctagagag 600
Query: 1831 ttgctcaagaaggacataccccctggaaacactatttccttgatcaccaagttacctgct 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgctcaagaaggacataccccctggaaacactatttccttgatcaccaagttacctgct 660
Query: 1891 ttgcaagatgatgaacctacaagtgattactatgggaggttttctgacagaggtcaaagc 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgcaagatgatgaacctacaagtgattactatgggaggttttctgacagaggtcaaagc 720
Query: 1951 aaccggannnnnnnttctagggatcggggaggttttagaagctcctcatcgggatggggt 2010
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaccggagggggggttctagggatcggggaggttttagaagctcctcatcgggatggggt 780
Query: 2011 ggggaccgaagctctgatgacgagtttggcaatacatatgggagaggggggagaggtggg 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggggaccgaagctctgatgacgagtttggcaatacatatgggagaggggggagaggtggg 840
Query: 2071 agaggtggtagaagttatggatccggtaacagcaggtctggaatgggaagaagaagcagt 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agaggtggtagaagttatggatccggtaacagcaggtctggaatgggaagaagaagcagt 900
Query: 2131 ggggatgactggctaattggaggtggacgatcaagcaggtcttcaccatcgaacagaggc 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggggatgactggctaattggaggtggacgatcaagcaggtcttcaccatcgaacagaggc 960
Query: 2191 agcagtggaggtgcctgttttaattgtggacaatctgggcattttgcagcagagtgtccc 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agcagtggaggtgcctgttttaattgtggacaatctgggcattttgcagcagagtgtccc 1020
Query: 2251 aaaaaacggaactcattttagtct 2274
||||||||||||||||||||||||
Sbjct: 1021 aaaaaacggaactcattttagtct 1044
>gnl|LJGI|TC57866 similar to UniRef100_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA
helicase 3; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 3 - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 804
Score = 1473 bits (743), Expect = 0.0
Identities = 749/751 (99%)
Strand = Plus / Plus
Query: 1 atggcttcttcttcttcttccgtcgcggttgtttcctccacataccaaacccctcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atggcttcttcttcttcttccgtcgcggttgtttcctccacataccaaacccctcttctc 113
Query: 61 gaactcctcaaacgaccaaccaccgcaacagccttcatttctctcgacaaccgctcccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gaactcctcaaacgaccaaccaccgcaacagccttcatttctctcgacaaccgctcccgc 173
Query: 121 ttcagctccgttcttctccgaacttccaacctcaacaggacccgcctccgccttgtttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ttcagctccgttcttctccgaacttccaacctcaacaggacccgcctccgccttgtttct 233
Query: 181 tcagccgttgccaccccgaactcctccgtcctcaccgccgaagaagccttcaagggtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcagccgttgccaccccgaactcctccgtcctcaccgccgaagaagccttcaagggtctt 293
Query: 241 gctcttgacgacgttaacgctgacgggtatgaccttgctcctcccaccactgtcagcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gctcttgacgacgttaacgctgacgggtatgaccttgctcctcccaccactgtcagcaac 353
Query: 301 gacgagctcgacatttctaagctgggtttgccttctgaactcgttcgttcgcttgtcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gacgagctcgacatttctaagctgggtttgccttctgaactcgttcgttcgcttgtcaac 413
Query: 361 cgtggaatcactagtcttttccccattcagagagctgtgttagtgcctgcactggaaggg 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 414 cgtggaatcactagtcttttccccattcagagagctgtgttagttcctgcactggaaggg 473
Query: 421 aaagatatcattgctagagcaaagactggaactggaaagaccttagcatttggaattcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaagatatcattgctagagcaaagactggaactggaaagaccttagcatttggaattcca 533
Query: 481 attatcaaaggtgtcactgatgattcacaaagtcctcagaggcggtctgggcgtcttcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 attatcaaaggtgtcactgatgattcacaaagtcctcagaggcggtctgggcgtcttcct 593
Query: 541 aaggcgttggtacttgcgccaactagggagttagcgaagcaggtcgagaaggagataaaa 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aaggcgttggtacttgcgccgactagggagttagcgaagcaggtcgagaaggagataaaa 653
Query: 601 gaatctgcaccttacctgagcacagtctgtgtttatggtggtgttgcttatgcaacacag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaatctgcaccttacctgagcacagtctgtgtttatggtggtgttgcttatgcaacacag 713
Query: 661 caaaatgcactttcgcgtggtgttgatgttgtggttggaacacctggcagaataattgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caaaatgcactttcgcgtggtgttgatgttgtggttggaacacctggcagaataattgac 773
Query: 721 ctagtaaatgggaacagccttagactgactg 751
|||||||||||||||||||||||||||||||
Sbjct: 774 ctagtaaatgggaacagccttagactgactg 804
>gnl|LJGI|TC81916 similar to UniRef100_Q2HUZ8 Cluster: Helicase, C-terminal; Zinc
finger, CCHC-type; GUCT; n=1; Medicago truncatula|Rep:
Helicase, C-terminal; Zinc finger, CCHC-type; GUCT -
Medicago truncatula (Barrel medic), partial (17%)
Length = 1008
Score = 161 bits (81), Expect = 2e-38
Identities = 190/225 (84%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 1718 ttctttctgatgtttattctccagctgctgatgaagttggaaaaatacatttaattgcag 1777
||||||| |||||||||||| |||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 18 ttctttcagatgtttattctacagctgctgatgaaat-ggaaaaatacacttacttgcag 76
Query: 1778 atgaaagggttcaaggagctgtttttgatcttccggaggatatttctagagagttgctca 1837
||||| |||| |||||||| || ||||||||||| ||||| ||| ||| |||||| || |
Sbjct: 77 atgaacgggtccaaggagccgtatttgatcttccagaggaaattgctaaagagttactta 136
Query: 1838 agaaggacataccccctggaaacactatttccttgatcaccaagttacctgctttgcaag 1897
| ||||| |||| ||||| | ||||||||| |||||||||||||||| |||||||||
Sbjct: 137 ataaggatgtaccagctggacatactatttccaagatcaccaagttacctcctttgcaag 196
Query: 1898 atgatgaacctacaagtgattactatgggaggttttctgacagag 1942
|||| | ||| | || |||| |||||||| ||||||||| ||||
Sbjct: 197 atgacggccctgcgagcgatttctatgggaagttttctgatagag 241
Score = 54.0 bits (27), Expect = 4e-06
Identities = 41/45 (91%), Gaps = 3/45 (6%)
Strand = Plus / Plus
Query: 2124 aagcagtggggatgactggctaattggaggtggacgatcaagcag 2168
||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 453 aagcagtggggatgattggctaattgga---ggacgatcaagcag 494