Miyakogusa Predicted Gene
- Lj5g3v1533410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1533410.1 tr|Q147S2|Q147S2_SELML Class III HD-Zip protein
HDZ33 OS=Selaginella moellendorffii PE=3
SV=1,37.25,3.8,seg,NULL,CUFF.55448.1
(220 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60643 similar to UniRef100_A7Q4K0 Cluster: Chromosome... 123 5e-28
gnl|LJGI|BP040947 similar to UniRef100_A4VYN2 Cluster: Holliday ... 109 7e-24
gnl|LJGI|TC77895 similar to UniRef100_A4VYN2 Cluster: Holliday j... 109 7e-24
gnl|LJGI|TC74847 similar to UniRef100_A4VYN2 Cluster: Holliday j... 101 2e-21
>gnl|LJGI|TC60643 similar to UniRef100_A7Q4K0 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 2565
Score = 123 bits (62), Expect = 5e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 151 agagactacactctacagcacggttgcaacttgcaagcaaaccttcttagagtttctgct 210
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2127 agagactacactctacagcacggttgcaacttgcaagcaaaccttctcagagtttctgct 2068
Query: 211 ttctgctgag 220
||||| ||||
Sbjct: 2067 ttctggtgag 2058
Score = 97.6 bits (49), Expect = 3e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 1 atgggccacctcctattaacgctaattcccattaattaccctaattccc 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2250 atgggccacctcctattaacgctaattcccattaattaccctaattccc 2202
>gnl|LJGI|BP040947 similar to UniRef100_A4VYN2 Cluster: Holliday junction
ATP-dependent DNA helicase ruvA; n=2; Streptococcus
suis|Rep: Holliday junction ATP-dependent DNA helicase
ruvA - Streptococcus suis (strain 98HAH33), partial
(9%)
Length = 450
Score = 109 bits (55), Expect = 7e-24
Identities = 55/55 (100%)
Strand = Plus / Minus
Query: 1 atgggccacctcctattaacgctaattcccattaattaccctaattcccattttc 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgggccacctcctattaacgctaattcccattaattaccctaattcccattttc 1
>gnl|LJGI|TC77895 similar to UniRef100_A4VYN2 Cluster: Holliday junction
ATP-dependent DNA helicase ruvA; n=2; Streptococcus
suis|Rep: Holliday junction ATP-dependent DNA helicase
ruvA - Streptococcus suis (strain 98HAH33), partial (9%)
Length = 536
Score = 109 bits (55), Expect = 7e-24
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1 atgggccacctcctattaacgctaattcccattaattaccctaattcccattttc 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atgggccacctcctattaacgctaattcccattaattaccctaattcccattttc 536
>gnl|LJGI|TC74847 similar to UniRef100_A4VYN2 Cluster: Holliday junction
ATP-dependent DNA helicase ruvA; n=2; Streptococcus
suis|Rep: Holliday junction ATP-dependent DNA helicase
ruvA - Streptococcus suis (strain 98HAH33), partial (9%)
Length = 477
Score = 101 bits (51), Expect = 2e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1 atgggccacctcctattaacgctaattcccattaattaccctaattcccattttc 55
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgggccacctcctatttacgctaattcccattaattaccctaattcccattttc 477