Miyakogusa Predicted Gene
- Lj5g3v1533400.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1533400.3 tr|I3SAA1|I3SAA1_LOTJA Flap endonuclease 1
OS=Lotus japonicus GN=FEN1 PE=2 SV=1,99.66,0,XPGRADSUPER,DNA repair
protein (XPGC)/yeast Rad; no description,NULL; coiled-coil,NULL;
XPG_2,XPG co,CUFF.55447.3
(876 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60113 similar to UniRef100_A7PRG5 Cluster: Chromosome... 1049 0.0
gnl|LJGI|TC62859 1043 0.0
>gnl|LJGI|TC60113 similar to UniRef100_A7PRG5 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 979
Score = 1049 bits (529), Expect = 0.0
Identities = 529/529 (100%)
Strand = Plus / Plus
Query: 1 atgaagaaacaagagcttgcaaaacgtctctcgaagagagctgaggctactgaggatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atgaagaaacaagagcttgcaaaacgtctctcgaagagagctgaggctactgaggatttg 435
Query: 61 tcagaagccttaaaggctgacaataaggaagatattgaaaaattcagtaaacggacagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcagaagccttaaaggctgacaataaggaagatattgaaaaattcagtaaacggacagtg 495
Query: 121 aaggtgacaaagcagcataatgaagactgcaaaaaactcttaagactcatgggagtgccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaggtgacaaagcagcataatgaagactgcaaaaaactcttaagactcatgggagtgccg 555
Query: 181 gtcgtagaggctccctcagaagcagaggctcaatgtgctgctctttgcaaagctggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtcgtagaggctccctcagaagcagaggctcaatgtgctgctctttgcaaagctggaatg 615
Query: 241 gtttatgctgtggcttctgaagacatggattccttgacgtttggagctcctaaatttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtttatgctgtggcttctgaagacatggattccttgacgtttggagctcctaaatttctt 675
Query: 301 cgccatctaatggatcctagctcgaaaaaagttcctgtgatggaatttgaagttgcgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cgccatctaatggatcctagctcgaaaaaagttcctgtgatggaatttgaagttgcgaag 735
Query: 361 attttggaggagttaaatctgaccatggaccaatttattgatttgtgcattctttctggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 attttggaggagttaaatctgaccatggaccaatttattgatttgtgcattctttctggg 795
Query: 421 tgtgattattgtgataacattcgagggattgggggccaaacagctttgaagctcatccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgtgattattgtgataacattcgagggattgggggccaaacagctttgaagctcatccgt 855
Query: 481 caacatggttctatcgaaaatattctggagaacataaacaaagaaaggt 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 caacatggttctatcgaaaatattctggagaacataaacaaagaaaggt 904
>gnl|LJGI|TC62859
Length = 812
Score = 1043 bits (526), Expect = 0.0
Identities = 547/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 322 tcgaaaaaagttcctgtgatggaatttgaagttgcgaagattttggaggagttaaatctg 381
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 tcgaaaaaagttcctgtgatggaatt-gaagttgcgaagattttggaggagttaaatctg 59
Query: 382 accatggaccaatttattgatttgtgcattctttctgggtgtgattattgtgataacatt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 accatggaccaatttattgatttgtgcattctttctgggtgtgattattgtgataacatt 119
Query: 442 cgagggattgggggccaaacagctttgaagctcatccgtcaacatggttctatcgaaaat 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgagggattgggggccaaacagctttgaagctcatccgtcaacatggttctatcgaaaat 179
Query: 502 attctggagaacataaacaaagaaaggtaccagataccagaggattggccatatcaggag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 attctggagaacataaacaaagaaaggtaccagataccagaggattggccatatcaggag 239
Query: 562 gctcgacggctttttaaggaaccaatggtcacaactggagacgatgaactaaatcttaag 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gctcgacggctttttaaggaaccaatggtcacaactggagacgatgaactaaatcttaag 299
Query: 622 tggtcagctccagatgaagaaggattaataacatttctggttaatgaaaatgggttcaac 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggtcagctccagatgaagaaggattaataacatttctggttaatgaaaatgggttcaac 359
Query: 682 agtgacagggtgacaaaggcaatagaaaaaattaaagctgcaaagaacaagtcatcacaa 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agtgacagggtgacaaaggcaatagaaaaaattaaagctgcaaagaacaagtcatcacaa 419
Query: 742 ggccgtttggagtcattctttaagccagctccaagttcatctgtacctatcaaacggaag 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggccgtttggagtcattctttaagccagctccaagttcatctgtacctatcaaacggaag 479
Query: 802 gaaacacctgacaataatgctaaagagaccaatnnnnnnnctaagggcagtggtggtagg 861
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 480 gaaacacctgacaataatgctaaagagaccaataaaaaaactaagggcagtggtggtagg 539
Query: 862 aagaagaaatagttg 876
|||||||||||||||
Sbjct: 540 aagaagaaatagttg 554