Miyakogusa Predicted Gene

Lj5g3v1529970.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1529970.2 tr|Q9FZD9|Q9FZD9_ARATH Agenet domain-containing
protein OS=Arabidopsis thaliana GN=T1K7.9 PE=1
SV=1,42.34,1e-18,Agenet,Agenet-like domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; Tudor-like domain presen,CUFF.55405.2
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72616 weakly similar to UniRef100_Q9ZPZ3 Cluster: T31...   815   0.0  

>gnl|LJGI|TC72616 weakly similar to UniRef100_Q9ZPZ3 Cluster: T31J12.4; n=1;
           Arabidopsis thaliana|Rep: T31J12.4 - Arabidopsis
           thaliana (Mouse-ear cress), partial (15%)
          Length = 520

 Score =  815 bits (411), Expect = 0.0
 Identities = 411/411 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacccaaatctgccaccgccgtctcgcccttcctgaaacccggtaccgcggtggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggcacccaaatctgccaccgccgtctcgcccttcctgaaacccggtaccgcggtggaa 169

                                                                       
Query: 61  gtctgttccgaagacgacggtttccgcggctcctggttcaccggcaagatcgtccgccgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gtctgttccgaagacgacggtttccgcggctcctggttcaccggcaagatcgtccgccgt 229

                                                                       
Query: 121 ctcgccaataacaaggtctcggtggagtatgatagcctgactgaggacgacgaaggcacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctcgccaataacaaggtctcggtggagtatgatagcctgactgaggacgacgaaggcacc 289

                                                                       
Query: 181 aagcccttgaaagaaaccctgcacattcgccagctccggccactccccttgccggagact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aagcccttgaaagaaaccctgcacattcgccagctccggccactccccttgccggagact 349

                                                                       
Query: 241 caacatgagttcaaattcggcgacgaggtggacgcttaccacaacgacgggtggtgggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caacatgagttcaaattcggcgacgaggtggacgcttaccacaacgacgggtggtgggag 409

                                                                       
Query: 301 ggtcatataactgaggaattagggaatggtaggttcgctgtgtatttcagagtctccaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggtcatataactgaggaattagggaatggtaggttcgctgtgtatttcagagtctccaag 469

                                                              
Query: 361 gagcggatcgagtttccgaaagaggagctgaggactcaccgtgaatggatt 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gagcggatcgagtttccgaaagaggagctgaggactcaccgtgaatggatt 520