Miyakogusa Predicted Gene

Lj5g3v1511500.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1511500.1 Non Chatacterized Hit- tr|I1NJ39|I1NJ39_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.24,0,PROKAR_LIPOPROTEIN,NULL; no description,WD40/YVTN
repeat-like-containing domain; SUBFAMILY NOT NAMED,TC63735.path2.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63735 similar to UniRef100_Q2HW32 Cluster: Lissenceph...   821   0.0  
gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissenceph...   527   e-149

>gnl|LJGI|TC63735 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
           homology motif; CTLH, C-terminal to LisH motif; Nitrous
           oxide reductase, N-terminal; WD40-like; Quinonprotein
           alcohol dehydrogenase-like; n=1; Medicago
           truncatula|Rep: Lissencephaly type-1-like homology
           motif; CTLH, C-terminal to LisH motif; Nitrous oxide
           reductase, N-terminal; WD40-like; Quinonprotein alcohol
           dehydrogenase-like - Medicago truncatula (Barrel medic),
           partial (15%)
          Length = 685

 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacgcattcggcagtgggttccccaagatgctctgtctgctcccatatcatgtgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atggaacgcattcggcagtgggttccccaagatgctctgtctgctcccatatcatgtgca 162

                                                                       
Query: 61  gtttattcttgcaacagtcagttaatatatgctacattttgcgatgcaaacgttggggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gtttattcttgcaacagtcagttaatatatgctacattttgcgatgcaaacgttggggtt 222

                                                                       
Query: 121 ttcgatgctgataccttgagactaagatgtcgaattgcaccatctgtatgcttgtcatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttcgatgctgataccttgagactaagatgtcgaattgcaccatctgtatgcttgtcatct 282

                                                                       
Query: 181 gctgctttaagcggaaaccaggctgtgtatccttttgtggttgcgactcatccactagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gctgctttaagcggaaaccaggctgtgtatccttttgtggttgcgactcatccactagaa 342

                                                                       
Query: 241 cctaaccagtttgctgttgggttaactgatgggtctgtcaaagtgatagaacctactgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cctaaccagtttgctgttgggttaactgatgggtctgtcaaagtgatagaacctactgaa 402

                                                                       
Query: 301 tcagaaggtaagtggggatcttctccacctgtggacaatggaatattgaatggtaggaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcagaaggtaagtggggatcttctccacctgtggacaatggaatattgaatggtaggaca 462

                                                                 
Query: 361 gcttcttcatctacaacaagcaaccacactgccgatcaggcccaaagataagat 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcttcttcatctacaacaagcaaccacactgccgatcaggcccaaagataagat 516


>gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
            homology motif; CTLH, C-terminal to LisH motif; Nitrous
            oxide reductase, N-terminal; WD40-like; Quinonprotein
            alcohol dehydrogenase-like; n=1; Medicago truncatula|Rep:
            Lissencephaly type-1-like homology motif; CTLH,
            C-terminal to LisH motif; Nitrous oxide reductase,
            N-terminal; WD40-like; Quinonprotein alcohol
            dehydrogenase-like - Medicago truncatula (Barrel medic),
            partial (31%)
          Length = 1563

 Score =  527 bits (266), Expect = e-149
 Identities = 377/414 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggaacgcattcggcagtgggttccccaagatgctctgtctgctcccatatcatgtgca 60
            ||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 657  atggatcgcattcgacagtgggttccccaagatgttctgtctgcccccatatcatgtgca 716

                                                                        
Query: 61   gtttattcttgcaacagtcagttaatatatgctacattttgcgatgcaaacgttggggtt 120
            | |||||| ||  |||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 717  gcttattcctgtgacagtcagttaatatatgctacattttgcgatgcaaacattggagtt 776

                                                                        
Query: 121  ttcgatgctgataccttgagactaagatgtcgaattgcaccatctgtatgcttgtcatct 180
            |||||||||||||  ||||||||| ||||||| || ||||| || |||||||||||||||
Sbjct: 777  ttcgatgctgatagtttgagactacgatgtcgtatcgcaccttcagtatgcttgtcatct 836

                                                                        
Query: 181  gctgctttaagcggaaaccaggctgtgtatccttttgtggttgcgactcatccactagaa 240
            || ||||| || |||| ||| |||||||||||| ||||||||||  || |||||||||||
Sbjct: 837  gccgctttgagtggaagccatgctgtgtatcctcttgtggttgcagctaatccactagaa 896

                                                                        
Query: 241  cctaaccagtttgctgttgggttaactgatgggtctgtcaaagtgatagaacctactgaa 300
            |||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 897  cctaaccagtttgcagttggtttaactgatgggtctgtcaaagtgatagaacccactgaa 956

                                                                        
Query: 301  tcagaaggtaagtggggatcttctccacctgtggacaatggaatattgaatggtaggaca 360
            |||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||
Sbjct: 957  tcagaaggtaagtggggatcttttccacctatggacaacggaaaattgaatggtaggaca 1016

                                                                  
Query: 361  gcttcttcatctacaacaagcaaccacactgccgatcaggcccaaagataagat 414
            |||||||||||||||||||||||||||||||| || ||||| ||| ||||||||
Sbjct: 1017 gcttcttcatctacaacaagcaaccacactgctgaccaggctcaatgataagat 1070