Miyakogusa Predicted Gene

Lj5g3v1500470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1500470.1 Non Chatacterized Hit- tr|K2BFT3|K2BFT3_9BACT
Uncharacterized protein (Fragment) OS=uncultured
bacte,35.06,7,seg,NULL,CUFF.55365.1
         (577 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80722 similar to UniRef100_Q4JEZ1 Cluster: Sialyltran...    94   1e-18
gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tR...    84   1e-15

>gnl|LJGI|TC80722 similar to UniRef100_Q4JEZ1 Cluster: Sialyltransferase-like
           protein; n=1; Medicago truncatula|Rep:
           Sialyltransferase-like protein - Medicago truncatula
           (Barrel medic), partial (23%)
          Length = 710

 Score = 93.7 bits (47), Expect = 1e-18
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 278 tttcagatctatctttttcttctgaagccttcagcatggttgaagaaaaaggtgtgaaat 337
           ||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 377 tttcagatccatctttttcttctggaaccttcggcatggttgaagaaaaaggtgtgaaat 318

              
Query: 338 tta 340
           |||
Sbjct: 317 tta 315


>gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
           class-2; Aminoacyl-transfer RNA synthetase, class II;
           n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
           class-2; Aminoacyl-transfer RNA synthetase, class II -
           Medicago truncatula (Barrel medic), partial (33%)
          Length = 910

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 96/114 (84%), Gaps = 10/114 (8%)
 Strand = Plus / Plus

                                                                       
Query: 354 aagctttgttcaaatctatcccagtgaaatcattgtttataggaacacgagaaat----- 408
           ||||||| || |||||||||||||| ||||||||||||| ||||||| |||||||     
Sbjct: 651 aagctttctttaaatctatcccagtaaaatcattgtttacaggaacatgagaaattcaag 710

                                                                 
Query: 409 ----ttaagatgggaactcaa-tttcatttttgtatttgattatcaaacttgcc 457
               |||||||||||||| || ||| |||||||||||||||||| |||||||||
Sbjct: 711 atgattaagatgggaactaaattttgatttttgtatttgattataaaacttgcc 764