Miyakogusa Predicted Gene
- Lj5g3v1499410.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1499410.2 Non Chatacterized Hit- tr|F2AP00|F2AP00_RHOBT
Putative uncharacterized protein OS=Rhodopirellula
bal,32.57,4e-19,TPR-like,NULL; TPR_2,Tetratricopeptide TPR2;
TPR_REGION,Tetratricopeptide repeat-containing domain; ,CUFF.55359.2
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74916 similar to UniRef100_Q2HW44 Cluster: TPR repeat... 1045 0.0
gnl|LJGI|BP043481 similar to UniRef100_Q2HW44 Cluster: TPR repea... 234 4e-61
>gnl|LJGI|TC74916 similar to UniRef100_Q2HW44 Cluster: TPR repeat; n=1; Medicago
truncatula|Rep: TPR repeat - Medicago truncatula (Barrel
medic), partial (83%)
Length = 894
Score = 1045 bits (527), Expect = 0.0
Identities = 530/531 (99%)
Strand = Plus / Plus
Query: 1 atgtccctcttcagacagggtgatgtttccgggtctgttgtggagttcgacaaggctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgtccctcttcagacagggtgatgtttccgggtctgttgtggagttcgacaaggctatt 340
Query: 61 cagctggaccctcgtcaaaaggcttatctttggcaaaggggactctcactttactacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagctggaccctcgtcaaaaggcttatctttggcaaaggggactctcactttactacctt 400
Query: 121 aatagatttgaagaaggagctgagcagtttcggttagatgttgctcaaaatccaaatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aatagatttgaagaaggagctgagcagtttcggttagatgttgctcaaaatccaaatgat 460
Query: 181 acagaagagtccatatggtgttttctttgtgaagctcaactatatggggtggatgaagcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acagaagagtccatatggtgttttctttgtgaagctcaactatatggggtggatgaagcg 520
Query: 241 aggaagcgatatctcgaggttggcagagactcaaggccagtcatgcgggaagcatataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aggaagcgatatctcgaggttggcagagactcaaggccagtcatgcgggaagcatataac 580
Query: 301 atgtttagagatggcggggatcctgaaaagcttgtagctgcgttctccaatggtagagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atgtttagagatggcggggatcctgaaaagcttgtagctgcgttctccaatggtagagaa 640
Query: 361 ggcgaatatttttatgcttctctatatgctggactttattacgaatctcagaatgaaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggcgaatatttttatgcttctctatatgctggactttattacgaatctcagaatgaaacg 700
Query: 421 gacgctgctaaagttcacatggttgctgcatgccagtcttcttatgggcaaaggtctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gacgctgctaaagttcacatggttgctgcatgccagtcttcttatgggcaaaggtctgat 760
Query: 481 gattatatggcttctctctcgaaggttcactgtctttgtcgaaattggacc 531
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gattatacggcttctctctcgaaggttcactgtctttgtcgaaattggacc 811
>gnl|LJGI|BP043481 similar to UniRef100_Q2HW44 Cluster: TPR repeat; n=1; Medicago
truncatula|Rep: TPR repeat - Medicago truncatula (Barrel
medic), partial (15%)
Length = 522
Score = 234 bits (118), Expect = 4e-61
Identities = 121/122 (99%)
Strand = Plus / Minus
Query: 410 agaatgaaacggacgctgctaaagttcacatggttgctgcatgccagtcttcttatgggc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agaatgaaacggacgctgctaaagttcacatggttgctgcatgccagtcttcttatgggc 120
Query: 470 aaaggtctgatgattatatggcttctctctcgaaggttcactgtctttgtcgaaattgga 529
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 caaggtctgatgattatatggcttctctctcgaaggttcactgtctttgtcgaaattgga 60
Query: 530 cc 531
||
Sbjct: 59 cc 58