Miyakogusa Predicted Gene
- Lj5g3v1498040.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1498040.2 tr|G7I8Q5|G7I8Q5_MEDTR Pre-mRNA-splicing factor
SF2 OS=Medicago truncatula GN=MTR_1g083400 PE=4 SV=1,83.88,0,no
description,Nucleotide-binding, alpha-beta plait; SPLICING FACTOR,
ARGININE/SERINE-RICH,NULL; RNA,CUFF.55334.2
(750 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67598 1007 0.0
gnl|LJGI|TC58662 similar to UniRef100_A7Q0B9 Cluster: Chromosome... 72 5e-12
gnl|LJGI|TC66764 similar to UniRef100_A8MR30 Cluster: Uncharacte... 54 1e-06
>gnl|LJGI|TC67598
Length = 1494
Score = 1007 bits (508), Expect = 0.0
Identities = 508/508 (100%)
Strand = Plus / Plus
Query: 1 atgagcagccggtcaagccgcacaatttatgttggcaaccttcctggcgatattcgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgagcagccggtcaagccgcacaatttatgttggcaaccttcctggcgatattcgcttg 170
Query: 61 agagaagtagaggatattttctacaagtttggtcctattgttgacattgatttgaagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agagaagtagaggatattttctacaagtttggtcctattgttgacattgatttgaagatt 230
Query: 121 cctccaagaccaccaggttatgcttttgttcagtttgaggatgctcgtgatgctgaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cctccaagaccaccaggttatgcttttgttcagtttgaggatgctcgtgatgctgaagat 290
Query: 181 gcaatctactatcgagatggttatgattttgatggttttcgattacgagttgaacttgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gcaatctactatcgagatggttatgattttgatggttttcgattacgagttgaacttgca 350
Query: 241 catggtggacggggttcttcatcatcagtagaccgttacagtagttatagtggtggcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 catggtggacggggttcttcatcatcagtagaccgttacagtagttatagtggtggcagc 410
Query: 301 agtagccgtggagcttccaggcgttctgactatcgtgttctggtgactggattacctcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agtagccgtggagcttccaggcgttctgactatcgtgttctggtgactggattacctcct 470
Query: 361 tctgcttcatggcaagacctgaaagatcacatgcgtaaagctggtgatgtgtgtttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tctgcttcatggcaagacctgaaagatcacatgcgtaaagctggtgatgtgtgtttctct 530
Query: 421 caagttttccgtgagcgtggaggcatgactgggatagtagactacaccaattatgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 caagttttccgtgagcgtggaggcatgactgggatagtagactacaccaattatgatgat 590
Query: 481 atgaaatatgccttaaggaaacttgatg 508
||||||||||||||||||||||||||||
Sbjct: 591 atgaaatatgccttaaggaaacttgatg 618
>gnl|LJGI|TC58662 similar to UniRef100_A7Q0B9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 814
Score = 71.9 bits (36), Expect = 5e-12
Identities = 258/332 (77%)
Strand = Plus / Plus
Query: 196 gatggttatgattttgatggttttcgattacgagttgaacttgcacatggtggacggggt 255
||||||||||||||||||||| || ||||| || || ||||| ||||||||||| |||
Sbjct: 299 gatggttatgattttgatggtcaccgtttacgggtggagcttgctcatggtggacgtggt 358
Query: 256 tcttcatcatcagtagaccgttacagtagttatagtggtggcagcagtagccgtggagct 315
|||||| ||| ||| || || |||||| |||| |||| | || | |||||||
Sbjct: 359 aattcatcttcaagagatcgatatagtagtcatagcagtggtcgtggtggacgtggagtg 418
Query: 316 tccaggcgttctgactatcgtgttctggtgactggattacctccttctgcttcatggcaa 375
|||||||| ||||| ||||||||||| || |||| || || ||||||| || |||||
Sbjct: 419 tccaggcgctctgaatatcgtgttctagtctctgggttgccctcttctgcatcctggcag 478
Query: 376 gacctgaaagatcacatgcgtaaagctggtgatgtgtgtttctctcaagttttccgtgag 435
|| || || ||||||||||| ||||| || ||||| || || || |||||||| | |||
Sbjct: 479 gatcttaaggatcacatgcgaaaagcaggggatgtatgcttttcccaagtttttcatgat 538
Query: 436 cgtggaggcatgactgggatagtagactacaccaattatgatgatatgaaatatgcctta 495
| | || | ||||| || || || |||||||| ||||||||||||||||||| |
Sbjct: 539 ggcaggggtactactggaattgtggattacaccaaccatgatgatatgaaatatgctgtc 598
Query: 496 aggaaacttgatgactcagaatttcgaaatgc 527
| ||| ||||||||||| || || ||||||||
Sbjct: 599 aagaagcttgatgactctgagttccgaaatgc 630
>gnl|LJGI|TC66764 similar to UniRef100_A8MR30 Cluster: Uncharacterized protein
At3g49430.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At3g49430.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (79%)
Length = 1293
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 19 cgcacaatttatgttggcaaccttcctggcgatat 53
||||||||||||||||||||||| ||||| |||||
Sbjct: 256 cgcacaatttatgttggcaacctgcctggtgatat 290
Score = 52.0 bits (26), Expect = 5e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 359 cttctgcttcatggcaagacctgaaagatcacatgcgtaaagctggtgatgtgtgttt 416
||||||| || |||||||| |||| ||||| ||||| |||||||||||||| |||||
Sbjct: 611 cttctgcatcctggcaagatttgaaggatcatatgcgaaaagctggtgatgtttgttt 668