Miyakogusa Predicted Gene
- Lj5g3v1498020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1498020.1 Non Chatacterized Hit- tr|C0PAR4|C0PAR4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,45.26,1e-17,ZF_RING_2,Zinc finger, RING-type; RING/U-box,NULL;
Ring finger,Zinc finger, RING-type; no descriptio,CUFF.55344.1
(927 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72319 homologue to UniRef100_A7PS18 Cluster: Chromoso... 973 0.0
gnl|LJGI|TC74369 weakly similar to UniRef100_A7Q0C9 Cluster: Chr... 549 e-155
>gnl|LJGI|TC72319 homologue to UniRef100_A7PS18 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (68%)
Length = 609
Score = 973 bits (491), Expect = 0.0
Identities = 513/519 (98%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 atgggtcttggtaacaacgaggacgagggcaatcaagaggtagatggaggagatggtggc 60
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 91 atgggtcttggtaacaacgaggacgaggataatcaagtggtagatggaggagatggtggc 150
Query: 61 ggtggcaagggtttcggttcagtgtcttgctcaatttgccttgaggttgttgctgacaat 120
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ggagccaagggtttcggttcagtgtcttgctcaatttgccttgaggttgttgctgacaat 210
Query: 121 ggggatagatcctgggctaagcttcattgtggtcatcaatttcatctggattgcattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggggatagatcctgggctaagcttcattgtggtcatcaatttcatctggattgcattgga 270
Query: 181 tcagcattcaatataaaaggggcaatgcaatgccctaattgtcggaagattgagaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcagcattcaatataaaaggggcaatgcaatgccctaattgtcggaagattgagaagggt 330
Query: 241 cagtggctttatgccaatggtggtcggtcatatccagaattcaacatggatgattggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagtggctttatgccaatggtggtcggtcatatccagaattcaacatggatgattggaca 390
Query: 301 tatgatgaggacctgtatgatctcagctactctgaattgcaatcctttggagttcactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tatgatgaggacctgtatgatctcagctactctgaattgcaatcctttggagttcactgg 450
Query: 361 tgcccgtttggcaacctggcaagacttccatcgccatttgaggaggggga-gttttcaca 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 451 tgcccgtttggcaacctggcaagacttccatcgccatttgaggagggggaggttttcaca 510
Query: 420 aactgcatatcatgatatgttgggacaacatgctatttttgctgaacatacagctgtatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aactgcatatcatgatatgttgggacaacatgctatttttgctgaacatacagctgtatc 570
Query: 480 atctggtagtcatcactgcccatatattgcttatgttgg 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atctggtagtcatcactgcccatatattgcttatgttgg 609
>gnl|LJGI|TC74369 weakly similar to UniRef100_A7Q0C9 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 2140
Score = 549 bits (277), Expect = e-155
Identities = 696/835 (83%), Gaps = 3/835 (0%)
Strand = Plus / Plus
Query: 86 cttgctcaatttgccttgaggttgttgctgacaatggggatagatcctgggctaagcttc 145
|||| ||||||||||| ||||||||||| |||| || ||| |||||| || |||||||
Sbjct: 404 cttgttcaatttgcctcgaggttgttgcagacaccggcgatcgatccttcgccaagcttc 463
Query: 146 attgtggtcatcaatttcatctggattgcattggatcagcattcaatataaaaggggcaa 205
||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 464 tatgtggccatcaatttcatctcgattgcattggatcagccttcaatatgaaaggggcaa 523
Query: 206 tgcaatgccctaattgtcggaagattgagaagggtcagtggctttatgccaatggtggtc 265
|||||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||| |
Sbjct: 524 tgcaatgcccaaattgtcgcaaggttgagaaaggtcagtggctttatgctaatggttccc 583
Query: 266 ggtcatatccagaattcaacatggatgattggacatatgatgaggacctgtatgatctca 325
| || ||||||||||| | |||||| || |||||| |||||||||| || ||||||||
Sbjct: 584 gttcttatccagaatttagcatggaagactggacacatgatgaggatctatatgatcttg 643
Query: 326 gctactctgaattgcaatcctttggagttcactggtgcccgtttggcaacctggcaagac 385
||||||||||| || ||||||||||||||||||||||| ||||| ||| |||| | |
Sbjct: 644 gctactctgaaatg---tcctttggagttcactggtgcccttttggtaacttggcccgtc 700
Query: 386 ttccatcgccatttgaggagggggagttttcacaaactgcatatcatgatatgttgggac 445
|||| || | || ||||| |||||| |||| |||||||||||||||| | ||||||
Sbjct: 701 ttccttcatctttcgaggaaggggagatttcctcaactgcatatcatgatttactgggac 760
Query: 446 aacatgctatttttgctgaacatacagctgtatcatctggtagtcatcactgcccatata 505
|||||||| | |||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 761 aacatgctgtatttgctgaacatacagctgtatcatctgctagtcatccttgtccatata 820
Query: 506 ttgcttatgttgggcccatacatccatcttcctccaattcaggtggaactgtatcagagg 565
||||||| |||| || |||||||| || ||||||| || ||||||||||| ||||| |
Sbjct: 821 ttgcttacattggaccgatacatccctcgacctccaactctggtggaactgtttcagaag 880
Query: 566 cttctaacttcaaccattggaacggttcatctgtgcctaatgatatgccagcctccttta 625
||||||||| ||| ||||| ||| || | |||| ||| |||||| |||||| |
Sbjct: 881 attctaactttccccactggaatggtccacccagacctagtgacatgccaacctcctaca 940
Query: 626 cgtttcctgctgtggatcttcattatcacggttgggaacaccattcccctcctttctcta 685
| | |||||| || ||||||||||||||| |||||||||||||||| ||| |||||||
Sbjct: 941 catatcctgcagtagatcttcattatcacagttgggaacaccattcatctcatttctctt 1000
Query: 686 cggcaagcagtcgtctggtggctgctgatcagccctcagtatcacctggtaatcaaaggc 745
| || | ||| ||||| | | |||||||||||| ||||||||| |||||| ||||||||
Sbjct: 1001 ctgccaccagccgtctaggtgttgctgatcagccttcagtatcagctggtactcaaaggc 1060
Query: 746 cagtgaggggtggttcggatgtaccgagatcaggatcttttatgcatcccttccttgttg 805
| | |||| |||||| || || || | || ||||||||| |||||||||||||||| |
Sbjct: 1061 ctgctagggttggttcagaggtccctcggtccggatcttttgtgcatcccttccttgtcg 1120
Query: 806 gtcacagttctgctgccagagcagggagttcagttgcttcctcattgattcctccttatc 865
|||||||||| | ||||||||| |||| || ||||| || ||| |||| ||||||||||
Sbjct: 1121 gtcacagttcgggtgccagagctgggaactctgttgcatcttcaatgatccctccttatc 1180
Query: 866 ctggtagcaatgctcgggcccgtgatagagtccaggctcttcaagcatactatca 920
| || ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1181 caggaagcaatgctcgtgctcgtgatagagtccaggctcttcaagcatactatca 1235