Miyakogusa Predicted Gene
- Lj5g3v1496770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1496770.1 Non Chatacterized Hit- tr|K4AWV3|K4AWV3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.67,0.000000000000001,PWWP DOMAIN-CONTAINING PROTEIN,NULL;
seg,NULL,CUFF.55354.1
(1953 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW595984 weakly similar to UniRef100_A2Q337 Cluster: PW... 670 0.0
gnl|LJGI|TC79893 147 3e-34
gnl|LJGI|TC62407 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 115 1e-24
gnl|LJGI|BP033864 similar to UniRef100_Q3E903 Cluster: Uncharact... 92 2e-17
gnl|LJGI|TC62240 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 60 5e-08
>gnl|LJGI|BW595984 weakly similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (8%)
Length = 459
Score = 670 bits (338), Expect = 0.0
Identities = 359/366 (98%)
Strand = Plus / Plus
Query: 1012 aaaccaaatttaactaggaaagtggagcgtccagctaagccacttgaacccactgtactg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaaccaaatttaactaggaaagtggagcgtccagctaagccacttgaacccactgtactg 64
Query: 1072 ctgatcaaatttcctcctgggacatcacttccatctgttgctgagctgaaggcaaggttt 1131
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgatcagatttcctcctgggacatcacttccatctgttgctgagctgaaggcaaggttt 124
Query: 1132 gcccgttttgggcccatcgaccaatcaagcctccgtgtcttctggaagtcttcatcatgt 1191
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gctcgttttgggccaatcgaccaatcaagcctccgtgtcttctggaagtcttcatcatgt 184
Query: 1192 cgagttattttcattcacagggttgattcaaaaactgcatataaacatgctgtatcaaat 1251
|||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 185 cgagttattttcatgcacagggttgatgcaaaaactgcatataaacatgctgtagcaaat 244
Query: 1252 caatccttgtttggcaatgtggctgttaggtacttcctacgggaacttggggattcttca 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 caatccttgtttggcaatgtggctgttaggtacttcctacgggaacttggggattcttca 304
Query: 1312 ctggatgtctctgaagctgccaagggtagaggagatggtggtaccttcgaaacacctcag 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctggatgtctctgaagctgccaagggtagaggagatggtggtaccttcgaaacacctcag 364
Query: 1372 attaag 1377
||||||
Sbjct: 365 attaag 370
>gnl|LJGI|TC79893
Length = 351
Score = 147 bits (74), Expect = 3e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1304 attcttcactggatgtctctgaagctgccaagggtagaggagatggtggtaccttcgaaa 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 attcttcactggatgtctctgaagctgccaagggtagaggagatggtggtaccttcgaaa 63
Query: 1364 cacctcagattaag 1377
||||||||||||||
Sbjct: 64 cacctcagattaag 77
>gnl|LJGI|TC62407 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (10%)
Length = 795
Score = 115 bits (58), Expect = 1e-24
Identities = 163/196 (83%), Gaps = 9/196 (4%)
Strand = Plus / Plus
Query: 1498 ggtaatggaggtagtagtaaaggaaccccacgtgtaaaattcatgttaggtgatgaagaa 1557
||||||||| ||| ||||||||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 36 ggtaatggaagtattagtaaaggaaacccgcgtgtaaaattcatgttaggtggggaagaa 95
Query: 1558 agtaataggggagagcaaataatggtgagtaattcaaacaacttggataatgctagtttc 1617
|||| ||||||||||||| |||||||| ||||| || |||| | |||||||||||
Sbjct: 96 agtagtaggggagagcaattaatggtgggtaat---aaaaactacaacaatgctagtttt 152
Query: 1618 cc---tgatggttgtgcacattctcctgttgctatgaattttaatagtaacaatgatcaa 1674
| ||||||| |||||| ||||| |||| ||| ||||||||||||| |||| ||||
Sbjct: 153 gctgatgatggtggtgcac---ctccttttgcaatggattttaatagtaagaatgttcaa 209
Query: 1675 aaggtcatttcccaac 1690
||||||| ||| ||||
Sbjct: 210 aaggtcacttctcaac 225
>gnl|LJGI|BP033864 similar to UniRef100_Q3E903 Cluster: Uncharacterized protein
At5g27650.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized, partial (1%)
Length = 216
Score = 91.7 bits (46), Expect = 2e-17
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 1904 tgcttaacttgatgggtctcttaggccatgtgccctaccatccactttga 1953
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 216 tgcttaacttgacgggtctcttaggccatgtgccctaccatccactttga 167
>gnl|LJGI|TC62240 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (10%)
Length = 767
Score = 60.0 bits (30), Expect = 5e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 550 ttgccacagctctttgttgaattgcaagctcttgctttggatccttttca 599
|||||||| || || | ||| |||||||||||||||||||||||||||||
Sbjct: 708 ttgccacaacttttgggtgatttgcaagctcttgctttggatccttttca 757