Miyakogusa Predicted Gene

Lj5g3v1495690.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1495690.2 tr|B3H5I5|B3H5I5_ARATH Ubiquitin family protein
OS=Arabidopsis thaliana GN=At5g57860 PE=4
SV=1,65.15,1e-17,Ubiquitin-like,NULL; AT7SL-1 (ARABIDOPSIS 7SL RNA
1),NULL; UBIQUITIN,NULL; ubiquitin,Ubiquitin; UBIQ,CUFF.55311.2
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82144 similar to UniRef100_A7PH88 Cluster: Chromosome...   617   e-176

>gnl|LJGI|TC82144 similar to UniRef100_A7PH88 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (86%)
          Length = 857

 Score =  617 bits (311), Expect = e-176
 Identities = 314/315 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatatgtacattcgtgttaagcgtaagatgacaacatacttcatccggtgcaagcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 233 atggatatgtacattcgtgttaagcgtaagatgacaacatacttcatgcggtgcaagcca 292

                                                                       
Query: 61  tctgataaaattcttgatgtaaagcagaagttggaagaactcgttgatcaaccagcgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tctgataaaattcttgatgtaaagcagaagttggaagaactcgttgatcaaccagcgaat 352

                                                                       
Query: 121 aatcaacagttaattctacatggtacaggggaggtattagaggacgctaagacgttggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aatcaacagttaattctacatggtacaggggaggtattagaggacgctaagacgttggca 412

                                                                       
Query: 181 gatcaaaaggttgaaaatgatgctgttgttgcactggccttgaggaaagatgataacgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gatcaaaaggttgaaaatgatgctgttgttgcactggccttgaggaaagatgataacgag 472

                                                                       
Query: 241 tttgaggaggtcaacattgttcggccaagcgaattctatccggctcgggaaggagatgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tttgaggaggtcaacattgttcggccaagcgaattctatccggctcgggaaggagatgct 532

                          
Query: 301 gccaattggtaatgc 315
           |||||||||||||||
Sbjct: 533 gccaattggtaatgc 547