Miyakogusa Predicted Gene

Lj5g3v1494680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1494680.1 tr|G7I841|G7I841_MEDTR Kinesin OS=Medicago
truncatula GN=MTR_1g082920 PE=3 SV=1,82.74,0,Kinesin,Kinesin, motor
domain; no description,Kinesin, motor domain; SUBFAMILY NOT
NAMED,NULL; FAMIL,CUFF.55309.1
         (1347 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-li...    56   6e-07
gnl|LJGI|TC80345 similar to UniRef100_A7P105 Cluster: Chromosome...    54   2e-06

>gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-like calmodulin
           binding protein; n=1; Gossypium hirsutum|Rep:
           Kinesin-like calmodulin binding protein - Gossypium
           hirsutum (Upland cotton) (Gossypium mexicanum), partial
           (11%)
          Length = 599

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 691 tataatgtttgcatatttgcctatgggcaaactggaactggtaaaacgtttacaat 746
           |||||||||||||||||||| ||||| ||||||||  |||| || || ||||||||
Sbjct: 107 tataatgtttgcatatttgcttatggtcaaactggctctggaaagacatttacaat 162


>gnl|LJGI|TC80345 similar to UniRef100_A7P105 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 1694

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 685 gatggatataatgtttgcatatttgcctatgggcaaactggaactggtaaaacgtttaca 744
           ||||| ||||| |||||||| ||||||||||| ||||| ||  |||||||||| | ||||
Sbjct: 599 gatggttataaggtttgcatttttgcctatggtcaaacagggtctggtaaaacctataca 658

              
Query: 745 atg 747
           |||
Sbjct: 659 atg 661