Miyakogusa Predicted Gene

Lj5g3v1494590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1494590.1 Non Chatacterized Hit- tr|D8SH96|D8SH96_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,30.71,4e-17,coiled-coil,NULL; seg,NULL;
Q8LI99_ORYSA_Q8LI99;,NULL,CUFF.55300.1
         (591 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599238 similar to UniRef100_A7QL38 Cluster: Chromosom...   105   3e-22

>gnl|LJGI|DC599238 similar to UniRef100_A7QL38 Cluster: Chromosome chr3 scaffold_117,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_117, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 541

 Score =  105 bits (53), Expect = 3e-22
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                       
Query: 14  aactaggtctctaccttcttgtggctgtcttttccctccacctgcttccaagtccagtca 73
           ||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||
Sbjct: 541 aactaggtctctaccttcttgtgtctgtgtttgccctccacctgcttcccagtccagtca 482

                    
Query: 74  tgtgtggag 82
           |||||||||
Sbjct: 481 tgtgtggag 473