Miyakogusa Predicted Gene
- Lj5g3v1473470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1473470.1 Non Chatacterized Hit- tr|I3SQH5|I3SQH5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Histone-fold; Histone-fold,Histone-fold;
CBFD_NFYB_HMF,Transcription factor CBF/NF-Y/,CUFF.55290.1
(785 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76130 similar to UniRef100_Q2HTM1 Cluster: Histone-fo... 624 e-178
gnl|LJGI|TC60207 homologue to UniRef100_Q2HTM1 Cluster: Histone-... 424 e-118
gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fo... 410 e-114
gnl|LJGI|BW598779 homologue to UniRef100_Q2HTM1 Cluster: Histone... 190 9e-48
gnl|LJGI|DC595386 similar to UniRef100_Q2HTM1 Cluster: Histone-f... 64 1e-09
>gnl|LJGI|TC76130 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (42%)
Length = 684
Score = 624 bits (315), Expect = e-178
Identities = 318/319 (99%)
Strand = Plus / Plus
Query: 467 agaagaatgacattgctgcagccatcacaagaactgatatctttgatttcttggttgaca 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaagaatgacattgctgcagccatcacaagaactgatatctttgatttcttggttgaca 60
Query: 527 tcgtgcctcgggaggacctgaaagatgaagtgcttgcaacaatgcccggaggagcaatgc 586
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 tcgtgcctcgggaggacctgaaagatgaagtgcttgcaaccatgcccggaggagcaatgc 120
Query: 587 ctgttgctgggcctggtgatggacttccttattgctacatgccgcctcaacatgcacagc 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgttgctgggcctggtgatggacttccttattgctacatgccgcctcaacatgcacagc 180
Query: 647 aagttggacctggaggtgtcatgatgcataaacctgtgatggacccgaatatgtatgcta 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttggacctggaggtgtcatgatgcataaacctgtgatggacccgaatatgtatgcta 240
Query: 707 tgcagcctgatcccttcatggcaccacaaatgtggctccaaccgccagagcaacaacaat 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcagcctgatcccttcatggcaccacaaatgtggctccaaccgccagagcaacaacaat 300
Query: 767 catctccagaccattagct 785
|||||||||||||||||||
Sbjct: 301 catctccagaccattagct 319
>gnl|LJGI|TC60207 homologue to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (98%)
Length = 1197
Score = 424 bits (214), Expect = e-118
Identities = 343/386 (88%)
Strand = Plus / Plus
Query: 239 tccaagccttttgggcaaatcagtatcaagaaattgacaaggtatctgatttcaagaacc 298
|||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||||
Sbjct: 324 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 383
Query: 299 acagccttcccctggcgaggatcaagaagattatgaaggctgatgaggatgtaaggatga 358
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 384 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 443
Query: 359 tatcagctgaggcgccggtcgtgttcgcgagggcgtgtgagatgttcatattagagctaa 418
||||||||||||| |||||| | || || ||||| ||||| ||||||||||||||| |||
Sbjct: 444 tatcagctgaggcaccggtcatatttgcaagggcatgtgaaatgttcatattagagttaa 503
Query: 419 ctctgcgttcctggaatcacactgaagagaacaagaggagaacacttcagaagaatgaca 478
| |||||||| ||||||||||||||||||||||| |||||||| || ||||| ||||| |
Sbjct: 504 ccctgcgttcttggaatcacactgaagagaacaaaaggagaactctccagaaaaatgata 563
Query: 479 ttgctgcagccatcacaagaactgatatctttgatttcttggttgacatcgtgcctcggg 538
| |||||||| || || || |||||||||||||| |||||||||||||| |||||||| |
Sbjct: 564 tcgctgcagcaattactaggactgatatctttgacttcttggttgacatagtgcctcgcg 623
Query: 539 aggacctgaaagatgaagtgcttgcaacaatgcccggaggagcaatgcctgttgctgggc 598
|||||||||||||||||||||| ||| |||| || ||||| |||||||||| |||||||
Sbjct: 624 aggacctgaaagatgaagtgctcgcatcaatcccaagaggatcaatgcctgtggctgggc 683
Query: 599 ctggtgatggacttccttattgctac 624
||||||| | |||||||||||||||
Sbjct: 684 ctggtgacgcgcttccttattgctac 709
Score = 71.9 bits (36), Expect = 6e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatctatggggg 40
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 86 atggatcatcaagggcatggccagaacccatccatggggg 125
>gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (55%)
Length = 685
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatctatgggggttggtggtagtgggccacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atggatcatcaagggcatggccagaacccatctatgggggttggtggtagtgggccacag 302
Query: 61 atgacatatggttctaatccataccttcagaatcctctaactgggccacctgggatggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atgacatatggttctaatccataccttcagaatcctctaactgggccacctgggatggtt 362
Query: 121 gtttcatcagctgggaatgttcaatcgactggtcagccagtgggaactcagatgggtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtttcatcagctgggaatgttcaatcgactggtcagccagtgggaactcagatgggtcat 422
Query: 181 cctcaacttgcttatcagcacatccat 207
|||||||||||||||||||||||||||
Sbjct: 423 cctcaacttgcttatcagcacatccat 449
Score = 406 bits (205), Expect = e-113
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 239 tccaagccttttgggcaaatcagtatcaagaaattgacaaggtatctgatttcaagaacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccaagccttttgggcaaatcagtatcaagaaattgacaaggtatctgatttcaagaacc 540
Query: 299 acagccttcccctggcgaggatcaagaagattatgaaggctgatgaggatgtaaggatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acagccttcccctggcgaggatcaagaagattatgaaggctgatgaggatgtaaggatga 600
Query: 359 tatcagctgaggcgccggtcgtgttcgcgagggcgtgtgagatgttcatattagagctaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatcagctgaggcgccggtcgtgttcgcgagggcgtgtgagatgttcatattagagctaa 660
Query: 419 ctctgcgttcctggaatcacactga 443
|||||||||||||||||||||||||
Sbjct: 661 ctctgcgttcctggaatcacactga 685
>gnl|LJGI|BW598779 homologue to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (47%)
Length = 463
Score = 190 bits (96), Expect = 9e-48
Identities = 129/140 (92%)
Strand = Plus / Plus
Query: 239 tccaagccttttgggcaaatcagtatcaagaaattgacaaggtatctgatttcaagaacc 298
|||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||||
Sbjct: 312 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 371
Query: 299 acagccttcccctggcgaggatcaagaagattatgaaggctgatgaggatgtaaggatga 358
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 372 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 431
Query: 359 tatcagctgaggcgccggtc 378
||||||||||||| ||||||
Sbjct: 432 tatcagctgaggcaccggtc 451
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 3 ggatcatcaagggcatggccagaacccatctatgg 37
|||||||||||||||||||| ||||||||| ||||
Sbjct: 75 ggatcatcaagggcatggcccgaacccatccatgg 109
>gnl|LJGI|DC595386 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (22%)
Length = 304
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatctatggggg 40
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 53 atggatcatcaagggcatggccaaaacccatccatggggg 92