Miyakogusa Predicted Gene
- Lj5g3v1453370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1453370.1 tr|B9I9T8|B9I9T8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_774811 PE=4
SV=1,60,1e-18,HMA_2,Heavy metal-associated domain, HMA; HMA, heavy
metal-associated domain,Heavy metal-associated ,CUFF.55286.1
(1128 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BI419973 homologue to UniRef100_Q43621 Cluster: Glutath... 392 e-108
gnl|LJGI|TC76643 392 e-108
gnl|LJGI|TC70644 weakly similar to UniRef100_Q4RSI9 Cluster: Chr... 198 5e-50
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome... 76 5e-13
gnl|LJGI|TC62294 similar to UniRef100_A7NWF9 Cluster: Chromosome... 72 8e-12
gnl|LJGI|TC81735 62 8e-09
gnl|LJGI|TC73299 62 8e-09
>gnl|LJGI|BI419973 homologue to UniRef100_Q43621 Cluster: Glutathione reductase,
cytosolic; n=1; Pisum sativum|Rep: Glutathione
reductase, cytosolic - Pisum sativum (Garden pea),
partial (23%)
Length = 536
Score = 392 bits (198), Expect = e-108
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 789 cattgacctacctgtaaaaatgaagggcaaaggtggaaacttcagcaatgaggggaagaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattgacctacctgtaaaaatgaagggcaaaggtggaaacttcagcaatgaggggaagaa 60
Query: 849 aggtaatggagatggaggtaacaagagcaaagagggaaagcagaaaggtggaggtggggg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtaatggagatggaggtaacaagagcaaagagggaaagcagaaaggtggaggtggggg 120
Query: 909 agatagtagtagtgataagaagaagaaaaccaaagacaaaaatggaggtggttttctagt 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatagtagtagtgataagaagaagaaaaccaaagacaaaaatggaggtggttttctagt 180
Query: 969 taagtttttaggccttgg 986
||||||||||||||||||
Sbjct: 181 taagtttttaggccttgg 198
>gnl|LJGI|TC76643
Length = 542
Score = 392 bits (198), Expect = e-108
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 803 taaaaatgaagggcaaaggtggaaacttcagcaatgaggggaagaaaggtaatggagatg 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaaatgaagggcaaaggtggaaacttcagcaatgaggggaagaaaggtaatggagatg 60
Query: 863 gaggtaacaagagcaaagagggaaagcagaaaggtggaggtgggggagatagtagtagtg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggtaacaagagcaaagagggaaagcagaaaggtggaggtgggggagatagtagtagtg 120
Query: 923 ataagaagaagaaaaccaaagacaaaaatggaggtggttttctagttaagtttttaggcc 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataagaagaagaaaaccaaagacaaaaatggaggtggttttctagttaagtttttaggcc 180
Query: 983 ttgggaagaagagcaaga 1000
||||||||||||||||||
Sbjct: 181 ttgggaagaagagcaaga 198
>gnl|LJGI|TC70644 weakly similar to UniRef100_Q4RSI9 Cluster: Chromosome 13 SCAF15000,
whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 13 SCAF15000, whole genome
shotgun sequence - Tetraodon nigroviridis (Green puffer),
partial (15%)
Length = 523
Score = 198 bits (100), Expect = 5e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 901 ggtgggggagatagtagtagtgataagaagaagaaaaccaaagacaaaaatggaggtggt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtgggggagatagtagtagtgataagaagaagaaaaccaaagacaaaaatggaggtggt 61
Query: 961 tttctagttaagtttttaggccttgggaagaagagcaaga 1000
||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttctagttaagtttttaggccttgggaagaagagcaaga 101
>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 993
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 61 tgtgatggctgtgagcagaaagtgaagaaacttctgcagaaaattgatgg 110
||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 351 tgtgaaggctgtgagcagaaagtaaagaaactgctgcagaaaattgatgg 400
>gnl|LJGI|TC62294 similar to UniRef100_A7NWF9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 726
Score = 71.9 bits (36), Expect = 8e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 52 aacatccattgtgatggctgtgagcagaaagtgaagaaacttctgcagaaaattgatggt 111
||||| || |||||||| ||| ||||||||||||||||| | |||||||||||||||||
Sbjct: 421 aacatacactgtgatgggtgtaagcagaaagtgaagaaaatcctgcagaaaattgatggg 480
Query: 112 gtgt 115
||||
Sbjct: 481 gtgt 484
>gnl|LJGI|TC81735
Length = 873
Score = 61.9 bits (31), Expect = 8e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 67 ggctgtgagcagaaagtgaagaaacttctgcagaaaattgatg 109
||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 161 ggctgtgagcagaaagtaaagaaactgctgcagaaaatcgatg 203
>gnl|LJGI|TC73299
Length = 1072
Score = 61.9 bits (31), Expect = 8e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 67 ggctgtgagcagaaagtgaagaaacttctgcagaaaattgatg 109
||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 112 ggctgtgagcagaaagtaaagaaactgctgcagaaaatcgatg 154