Miyakogusa Predicted Gene

Lj5g3v1452280.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1452280.1 NODE_31828_length_1309_cov_22.862490.path2.1
         (729 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop...   535   e-151
gnl|LJGI|TC73753 similar to UniRef100_A7PSE3 Cluster: Chromosome...   165   5e-40
gnl|LJGI|TC73122 homologue to UniRef100_UPI0000162E7F Cluster: b...   145   4e-34
gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome...    70   2e-11
gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome...    62   5e-09

>gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop-helix DNA-binding;
           n=1; Medicago truncatula|Rep: Helix-loop-helix
           DNA-binding - Medicago truncatula (Barrel medic),
           partial (24%)
          Length = 675

 Score =  535 bits (270), Expect = e-151
 Identities = 270/270 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttaccccacatgaatgagcttcaagaaaccactgaccccagcaacacttcaaatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgttaccccacatgaatgagcttcaagaaaccactgaccccagcaacacttcaaatttt 465

                                                                       
Query: 61  gcttcagctaggcctaagaggcgcagagccagaagtagaaagaacaaggaagaaattgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcttcagctaggcctaagaggcgcagagccagaagtagaaagaacaaggaagaaattgag 525

                                                                       
Query: 121 aaccagagaatgactcacattgctgtggagcgaaatagaagaaagcagatgaatgagtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaccagagaatgactcacattgctgtggagcgaaatagaagaaagcagatgaatgagtat 585

                                                                       
Query: 181 ctctctgttcttcgctctctcatgccagaatcatacatccaaaggggtgatcaagcttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctctctgttcttcgctctctcatgccagaatcatacatccaaaggggtgatcaagcttct 645

                                         
Query: 241 ataattggaggggctattaactttgttaga 270
           ||||||||||||||||||||||||||||||
Sbjct: 646 ataattggaggggctattaactttgttaga 675


>gnl|LJGI|TC73753 similar to UniRef100_A7PSE3 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 521

 Score =  165 bits (83), Expect = 5e-40
 Identities = 83/83 (100%)
 Strand = Plus / Plus

                                                                       
Query: 647 gcaagttgggatcagtggatgatatagctgcagctgtataccagatgttggataggattc 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcaagttgggatcagtggatgatatagctgcagctgtataccagatgttggataggattc 60

                                  
Query: 707 accaagaggcaatgctgaattaa 729
           |||||||||||||||||||||||
Sbjct: 61  accaagaggcaatgctgaattaa 83


>gnl|LJGI|TC73122 homologue to UniRef100_UPI0000162E7F Cluster: basic
           helix-loop-helix (bHLH) family protein; n=1; Arabidopsis
           thaliana|Rep: basic helix-loop-helix (bHLH) family
           protein - Arabidopsis thaliana, partial (14%)
          Length = 464

 Score =  145 bits (73), Expect = 4e-34
 Identities = 85/89 (95%)
 Strand = Plus / Plus

                                                                       
Query: 76  aagaggcgcagagccagaagtagaaagaacaaggaagaaattgagaaccagagaatgact 135
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aagaggcgcagagccagaagcagaaagaacaaggaagaaattgagaaccagagaatgact 435

                                        
Query: 136 cacattgctgtggagcgaaatagaagaaa 164
           ||||||||||| ||||| || ||||||||
Sbjct: 436 cacattgctgtagagcgcaacagaagaaa 464


>gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 770

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 220 caaaggggtgatcaagcttctataattggaggggctattaactttgt 266
           ||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 556 caaaggggtgatcaagcttctatcattggaggtgccattaactttgt 602


>gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 539

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 220 caaaggggtgatcaagcttctataattggaggggctattaactttgt 266
           ||||||||||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 487 caaaggggtgaccaagcgtctattattggaggtgctattaactttgt 533