Miyakogusa Predicted Gene

Lj5g3v1452220.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1452220.1 tr|I4H6M4|I4H6M4_MICAE Similar to
tr|P74145|P74145 OS=Microcystis aeruginosa PCC 9807
GN=MICAF_30700,33.51,7e-19,Repair_PSII,TPM domain;
seg,NULL,CUFF.55273.1
         (897 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64417 similar to UniRef100_A7PSE9 Cluster: Chromosome...  1778   0.0  
gnl|LJGI|FS338812 similar to UniRef100_A7PSE9 Cluster: Chromosom...  1316   0.0  
gnl|LJGI|AV771788 weakly similar to UniRef100_A9S257 Cluster: Pr...   137   1e-31

>gnl|LJGI|TC64417 similar to UniRef100_A7PSE9 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 1187

 Score = 1778 bits (897), Expect = 0.0
 Identities = 897/897 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaaccatttttcctcctcacatgactctccctccactctccagcatcaaaccttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  atgggaaccatttttcctcctcacatgactctccctccactctccagcatcaaaccttca 126

                                                                       
Query: 61  cccacaagactcctcttatctcctccctctcccttacccaagtccaattctctcttctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cccacaagactcctcttatctcctccctctcccttacccaagtccaattctctcttctgc 186

                                                                       
Query: 121 tccagacccattatttccagcctcagaaagaatcaaactttatctcttaaaccttcattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tccagacccattatttccagcctcagaaagaatcaaactttatctcttaaaccttcattg 246

                                                                       
Query: 181 gcttcctcaggcacaagctggctgagtcatgctcaacagggtcttgcagctttggctatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gcttcctcaggcacaagctggctgagtcatgctcaacagggtcttgcagctttggctatc 306

                                                                       
Query: 241 accttggcactgaatttcagcccaatcttcctcagtggcaatgctctggcttctgagttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 accttggcactgaatttcagcccaatcttcctcagtggcaatgctctggcttctgagttt 366

                                                                       
Query: 301 gatgttctcaacgaggttccagccaaggattcttatgtggttgatgatgcaggagtgctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gatgttctcaacgaggttccagccaaggattcttatgtggttgatgatgcaggagtgctt 426

                                                                       
Query: 361 agtcgggtcactaggtctgatttgaagggactattgtctgatttggagtcgaggaagaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtcgggtcactaggtctgatttgaagggactattgtctgatttggagtcgaggaagaaa 486

                                                                       
Query: 421 tttcacatcaattttatcacagttcgaaaactcacgagcaaagctgatgcttttgagtat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttcacatcaattttatcacagttcgaaaactcacgagcaaagctgatgcttttgagtat 546

                                                                       
Query: 481 gctgaccaagttttggagcgatggtatccttctgtagaagagggtaatgacaagggtatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gctgaccaagttttggagcgatggtatccttctgtagaagagggtaatgacaagggtatt 606

                                                                       
Query: 541 gtggttcttgtcaccagtcagaaagaaggagcggtcaccggtggcccggcttttgtccaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtggttcttgtcaccagtcagaaagaaggagcggtcaccggtggcccggcttttgtccaa 666

                                                                       
Query: 601 gcagtgggagaaaatattcttgatgccactgtcgcagagaaccttccagtattggctacg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gcagtgggagaaaatattcttgatgccactgtcgcagagaaccttccagtattggctacg 726

                                                                       
Query: 661 gatgagaagtacaacgaagctgttctaagcactgctaaacggctagttgcagccattgat 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gatgagaagtacaacgaagctgttctaagcactgctaaacggctagttgcagccattgat 786

                                                                       
Query: 721 gggcttccagatcctggtggtccccaagttaaagacaacaaacgtgagtctaacttcaga 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gggcttccagatcctggtggtccccaagttaaagacaacaaacgtgagtctaacttcaga 846

                                                                       
Query: 781 accaaggaagagacagaacagaagcgtggacaattctctcttgtagttggaggtttgttg 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 accaaggaagagacagaacagaagcgtggacaattctctcttgtagttggaggtttgttg 906

                                                                    
Query: 841 gtcgtcgcatttgttgttcctatgttacaatactatgcttatgtagccaaaaaataa 897
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gtcgtcgcatttgttgttcctatgttacaatactatgcttatgtagccaaaaaataa 963


>gnl|LJGI|FS338812 similar to UniRef100_A7PSE9 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 785

 Score = 1316 bits (664), Expect = 0.0
 Identities = 664/664 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaaccatttttcctcctcacatgactctccctccactctccagcatcaaaccttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgggaaccatttttcctcctcacatgactctccctccactctccagcatcaaaccttca 181

                                                                       
Query: 61  cccacaagactcctcttatctcctccctctcccttacccaagtccaattctctcttctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cccacaagactcctcttatctcctccctctcccttacccaagtccaattctctcttctgc 241

                                                                       
Query: 121 tccagacccattatttccagcctcagaaagaatcaaactttatctcttaaaccttcattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tccagacccattatttccagcctcagaaagaatcaaactttatctcttaaaccttcattg 301

                                                                       
Query: 181 gcttcctcaggcacaagctggctgagtcatgctcaacagggtcttgcagctttggctatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcttcctcaggcacaagctggctgagtcatgctcaacagggtcttgcagctttggctatc 361

                                                                       
Query: 241 accttggcactgaatttcagcccaatcttcctcagtggcaatgctctggcttctgagttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 accttggcactgaatttcagcccaatcttcctcagtggcaatgctctggcttctgagttt 421

                                                                       
Query: 301 gatgttctcaacgaggttccagccaaggattcttatgtggttgatgatgcaggagtgctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatgttctcaacgaggttccagccaaggattcttatgtggttgatgatgcaggagtgctt 481

                                                                       
Query: 361 agtcgggtcactaggtctgatttgaagggactattgtctgatttggagtcgaggaagaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agtcgggtcactaggtctgatttgaagggactattgtctgatttggagtcgaggaagaaa 541

                                                                       
Query: 421 tttcacatcaattttatcacagttcgaaaactcacgagcaaagctgatgcttttgagtat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tttcacatcaattttatcacagttcgaaaactcacgagcaaagctgatgcttttgagtat 601

                                                                       
Query: 481 gctgaccaagttttggagcgatggtatccttctgtagaagagggtaatgacaagggtatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gctgaccaagttttggagcgatggtatccttctgtagaagagggtaatgacaagggtatt 661

                                                                       
Query: 541 gtggttcttgtcaccagtcagaaagaaggagcggtcaccggtggcccggcttttgtccaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gtggttcttgtcaccagtcagaaagaaggagcggtcaccggtggcccggcttttgtccaa 721

                                                                       
Query: 601 gcagtgggagaaaatattcttgatgccactgtcgcagagaaccttccagtattggctacg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcagtgggagaaaatattcttgatgccactgtcgcagagaaccttccagtattggctacg 781

               
Query: 661 gatg 664
           ||||
Sbjct: 782 gatg 785


>gnl|LJGI|AV771788 weakly similar to UniRef100_A9S257 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (15%)
          Length = 338

 Score =  137 bits (69), Expect = 1e-31
 Identities = 132/152 (86%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 739 ggtccccaagttaaagacaacaaacgtgagtctaacttcagaaccaaggaagagacagaa 798
           |||||||||| | |||||  | ||| ||||| ||||||||||||| ||||||||||||| 
Sbjct: 338 ggtccccaagctcaagactcccaacctgagtttaacttcagaacccaggaagagacagac 279

                                                                       
Query: 799 cagaagcgtggacaattctctcttgtagttggaggtttgttggtcgtcgcatttgttgtt 858
           | |||||  |||| ||||||||||||  |||||||||||||||||||||| |||||||||
Sbjct: 278 ccgaagccgggaccattctctcttgttattggaggtttgttggtcgtcgcctttgttgtt 219

                                           
Query: 859 cctatgttacaatac--tatgcttatgtagcc 888
           |||||||||| ||||   ||||||||||||||
Sbjct: 218 cctatgttaccatacctaatgcttatgtagcc 187