Miyakogusa Predicted Gene
- Lj5g3v1440060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1440060.1 Non Chatacterized Hit- tr|I3S0F2|I3S0F2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.12,0,no
description,Signal transduction histidine kinase, phosphotransfer
(Hpt) domain; Hpt,Signal transd,CUFF.55254.1
(456 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023872 similar to UniRef100_A2Q3H8 Cluster: Hpt; n=1;... 807 0.0
gnl|LJGI|TC58979 similar to UniRef100_A7NWB2 Cluster: Chromosome... 70 1e-11
>gnl|LJGI|GO023872 similar to UniRef100_A2Q3H8 Cluster: Hpt; n=1; Medicago
truncatula|Rep: Hpt - Medicago truncatula (Barrel
medic), partial (92%)
Length = 711
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1 atggatggtggtataattcagctgcagaggcaccttgttgattacactgcctccctattc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 54 atggatggtggtataattcagccgcagaggcaccttgttgattacactgcctccctattc 113
Query: 61 gatgagggctttctagatgaacagtttaaccagcttgagctacttcaagatgaaagcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gatgagggctttctagatgaacagtttaaccagcttgagctacttcaagatgaaagcaac 173
Query: 121 ccagattttgtggttgaagtggtcactctcttttttcaagatgcagagaggcttcttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ccagattttgtggttgaagtggtcactctcttttttcaagatgcagagaggcttcttgat 233
Query: 181 gagctcacaaaggctctaggacaggcaagcattgatttcaaaaagttggatgctcatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gagctcacaaaggctctaggacaggcaagcattgatttcaaaaagttggatgctcatgtt 293
Query: 241 caccaactgaagggtagcagctccagtgttggagcacagagagttcacaaagcctgcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 caccaactgaagggtagcagctccagtgttggagcacagagagttcacaaagcctgcatt 353
Query: 301 tcctttagaaattcatgtgaggagaagaacattgaagggtgtcttaaaagcttgcaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcctttagaaattcatgtgaggagaagaacattgaagggtgtcttaaaagcttgcaacaa 413
Query: 361 gtaagacatgagtattccttggtgaaaagtaaacttgagactctcttcaag 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtaagacatgagtattccttggtgaaaagtaaacttgagactctcttcaag 464
>gnl|LJGI|TC58979 similar to UniRef100_A7NWB2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 769
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 106 caagatgaaagcaacccagattttgtggttgaagtggtcactctcttttttcaagatgca 165
|||||||| | |||||| || ||||||||||||||||| ||||||||||| ||||| |
Sbjct: 205 caagatgagaacaaccctgagtttgtggttgaagtggtgtctctcttttttgaagattct 264
Query: 166 gagaggcttct 176
|||||||||||
Sbjct: 265 gagaggcttct 275