Miyakogusa Predicted Gene
- Lj5g3v1427960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1427960.1 tr|B9MZN3|B9MZN3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1112774 PE=4
SV=1,30.97,1e-18,seg,NULL; DUF3444,Domain of unknown function DUF3444;
RING FINGER PROTEIN,NULL; coiled-coil,NULL,CUFF.55269.1
(1495 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338578 similar to UniRef100_A0G165 Cluster: Adhesin H... 733 0.0
gnl|LJGI|GO019116 weakly similar to UniRef100_A7NW98 Cluster: Ch... 436 e-121
gnl|LJGI|TC58996 similar to UniRef100_A7QX12 Cluster: Chromosome... 192 4e-48
gnl|LJGI|TC74494 similar to UniRef100_A2Q3G0 Cluster: Heat shock... 78 2e-13
>gnl|LJGI|FS338578 similar to UniRef100_A0G165 Cluster: Adhesin HecA; n=1;
Burkholderia phymatum STM815|Rep: Adhesin HecA -
Burkholderia phymatum STM815, partial (3%)
Length = 685
Score = 733 bits (370), Expect = 0.0
Identities = 370/370 (100%)
Strand = Plus / Plus
Query: 1 atgcgtgctaaggttctggagctggagcagcgaattggtgttgccgtggagaaggaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgcgtgctaaggttctggagctggagcagcgaattggtgttgccgtggagaaggaagag 375
Query: 61 gagatggcgaggaagtgcagcgcgttggcgagtgagaagaaggatatggagaagagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gagatggcgaggaagtgcagcgcgttggcgagtgagaagaaggatatggagaagagtgtt 435
Query: 121 gaggtgttgacggagaagagggatagtgtttgtagggtactggatatggttcagagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaggtgttgacggagaagagggatagtgtttgtagggtactggatatggttcagagggaa 495
Query: 181 ttggagagtaagcggcgcgaggttgatgtggccaatagcgcgagggatgagattgagcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttggagagtaagcggcgcgaggttgatgtggccaatagcgcgagggatgagattgagcgg 555
Query: 241 gtgaaagttagtcatgagtataaaattgcggagttgcaaggggaggtggatcgagtgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtgaaagttagtcatgagtataaaattgcggagttgcaaggggaggtggatcgagtgagg 615
Query: 301 gatgtggtggatgagttgtatgggtcatttaaggagtttaaggacaaaaatgaggagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gatgtggtggatgagttgtatgggtcatttaaggagtttaaggacaaaaatgaggagtta 675
Query: 361 gtttctcaag 370
||||||||||
Sbjct: 676 gtttctcaag 685
>gnl|LJGI|GO019116 weakly similar to UniRef100_A7NW98 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 808
Score = 436 bits (220), Expect = e-121
Identities = 505/596 (84%), Gaps = 8/596 (1%)
Strand = Plus / Plus
Query: 825 tcctgatacagatttcaatgatttcgataaggataaggcggaggaatgttttgctgtaaa 884
|||||||||||||||||||||||| ||||||||||||| || || ||||||||||| ||
Sbjct: 161 tcctgatacagatttcaatgattttgataaggataaggaagaagattgttttgctgttaa 220
Query: 885 tcagatatgggcagtttatgatagccctgatgttctgccaagaatttatgctcttgtcag 944
||| | |||||| ||||||||||| |||||| |||||||| ||||||||||||| ||
Sbjct: 221 tcaattctgggcaatttatgatagcactgatggcatgccaagattttatgctcttgtgag 280
Query: 945 gaatgtggcctcccctttcaagttgacgattacttggatggaacctgacccagatgacca 1004
||| |||||| ||||||| ||||||| |||| ||||| ||||||||||||||||||| |
Sbjct: 281 gaaagtggccaccccttttaagttgaagatttcttggttggaacctgacccagatgatga 340
Query: 1005 aaaggagatagattggcatgatgcaggtttgcctattgcttgtggtaagttcaaacttgg 1064
| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 341 aggtgagatagattggcatgatgcagaattgcctattgcttgtggtaagttcaaacttgg 400
Query: 1065 tgcttctgaggatgttgctgatcttagtatcttctctcatcagatcaagttcctgaaaat 1124
|| ||||||| ||| | |||| || ||| |||||||||||||| ||| | ||||||
Sbjct: 401 tggttctgagactgtaacagatcgtactatgttctctcatcagatacagtgcatgaaaag 460
Query: 1125 tggt---gaaggttc---ttatgtggtatatcccaagaagggagaaacttgggcaatttt 1178
|| ||||||| |||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 461 aagttccaaaggttcttattatatggtatatcccaagaagggagaaacttgggcactttt 520
Query: 1179 tagatattgggatatcaaatggagttctaatccagaaactcaattgaagggggagtttga 1238
||| |||||||||||||||||||| ||| |||||||| | | |||||| ||| ||||
Sbjct: 521 cagagattgggatatcaaatggagtgctactccagaaaattatttgaagaatgagattga 580
Query: 1239 atttgtggaaatcctgtcagactttactcagaatgttggcattgaagttgctcgcctagt 1298
|| ||| |||||||| ||||| |||||| |||||||||| ||||||||||||| ||||||
Sbjct: 581 atgtgttgaaatcctatcagattttactgagaatgttggtattgaagttgctcacctagt 640
Query: 1299 caaagtgaaagggtttgttagtctctttcagaaatctaagaagaagggagttaacgtatt 1358
|||||| || |||||||||||||||||||||||| || ||||||| ||||| | |||
Sbjct: 641 caaagtaaacgggtttgttagtctctttcagaaaactgagaagaatggagtcagtatatc 700
Query: 1359 ttatgttctgcctaatgagctgtatcggttctcacaccggattccttcatataaga 1414
|| |||| ||||||||||| || | |||||||||||| | ||||||||||||||
Sbjct: 701 ttgtgttggacctaatgagctcta-cagttctcacaccgta-tccttcatataaga 754
>gnl|LJGI|TC58996 similar to UniRef100_A7QX12 Cluster: Chromosome chr14 scaffold_211,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_211, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 827
Score = 192 bits (97), Expect = 4e-48
Identities = 282/340 (82%), Gaps = 9/340 (2%)
Strand = Plus / Plus
Query: 954 ctcccctttcaagttgacgattacttggatggaacctgacccagatgaccaaaaggagat 1013
||||||||| |||||| |||| ||||| |||| ||||||||| |||||||| |||||
Sbjct: 441 ctcccctttgaagttggagatttcttggttggagcctgacccaaatgaccaaggggagaa 500
Query: 1014 agattggcatgatgcaggtttgcctattgcttgtggtaagttcaaacttggtgcttctga 1073
|||||| ||||| |||| ||||||||||||||||||||||||||| | ||| |||| |
Sbjct: 501 agattgccatgacgcagatttgcctattgcttgtggtaagttcaa---tagtgattctca 557
Query: 1074 ggatgttgctgatcttagtatcttctctcatcagatcaagttcctgaa---aattggtga 1130
| ||||| ||||||||| |||||||||||| ||||| | | | |||| || ||| |
Sbjct: 558 gcatgttactgatcttactatcttctctcaccagatacaatgcatgaaaagaagtggaaa 617
Query: 1131 aggttcttatgtggtatatcccaagaagggagaaacttgggcaatttttagatattggga 1190
| |||||||| ||| ||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 618 aagttcttatatggcatatcccaagaagggagaaacttgggctattttcagggattggga 677
Query: 1191 tatcaaatggagttctaatccagaaactcaattgaagggggagtttgaatttgtggaaat 1250
|||||||||||||| ||||||||||| ||| || | | |||||||||| ||| |||||
Sbjct: 678 tatcaaatggagttgtaatccagaaaatcattt--attgtgagtttgaatatgtagaaat 735
Query: 1251 cctgtcaga-ctttactcagaatgttggcattgaagttgc 1289
||| ||||| ||| | ||||||||||||||| ||||||
Sbjct: 736 cctatcagattttttatgagaatgttggcattgtagttgc 775
>gnl|LJGI|TC74494 similar to UniRef100_A2Q3G0 Cluster: Heat shock protein DnaJ; n=1;
Medicago truncatula|Rep: Heat shock protein DnaJ -
Medicago truncatula (Barrel medic), partial (4%)
Length = 572
Score = 77.8 bits (39), Expect = 2e-13
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1369 cctaatgagctgtatcggttctcacaccggattccttcatataagatgactggtaaagaa 1428
||||||||||| || || || ||||| | ||||||||| ||||||||||||||| | |||
Sbjct: 28 cctaatgagctataccgattttcacatcagattccttcgtataagatgactggtgatgaa 87
Query: 1429 aggaaaggtgttccaaaaggatgttttgaacttga 1463
|| |||||||||||| ||| | ||||||||||||
Sbjct: 88 agagaaggtgttccaagaggttcttttgaacttga 122