Miyakogusa Predicted Gene
- Lj5g3v1427900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1427900.1 tr|B9I833|B9I833_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1096388 PE=4
SV=1,29.18,2e-17,JDOMAIN,Heat shock protein DnaJ; DUF3444,Domain of
unknown function DUF3444; DnaJ,Heat shock protein,CUFF.55244.1
(2018 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO019116 weakly similar to UniRef100_A7NW98 Cluster: Ch... 1469 0.0
gnl|LJGI|AV780900 305 6e-82
gnl|LJGI|TC58996 similar to UniRef100_A7QX12 Cluster: Chromosome... 276 5e-73
gnl|LJGI|TC74494 similar to UniRef100_A2Q3G0 Cluster: Heat shock... 82 2e-14
gnl|LJGI|TC79100 weakly similar to UniRef100_Q5ZCV2 Cluster: DNA... 68 2e-10
>gnl|LJGI|GO019116 weakly similar to UniRef100_A7NW98 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 808
Score = 1469 bits (741), Expect = 0.0
Identities = 758/761 (99%), Gaps = 2/761 (0%)
Strand = Plus / Plus
Query: 1068 caaagaggtgggaaataaaataagtagcccaccggatgaaacatctttaagaaacaaaag 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caaagaggtgggaaataaaataagtagcccaccggatgaaacatctttaagaaacaaaag 61
Query: 1128 caaatctgagcaatctcaaggagagaaagtattggagtctgatcttgatgttagaagttc 1187
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caaatctgagtaatctcaaggagagaaagtattggagtctgatcttgatgttagaagttc 121
Query: 1188 aaaagatgacaactgctctcaattgaatcctgtgaccattcctgatacagatttcaatga 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaaagatgacaactgctctcaattgaatcctgtgaccattcctgatacagatttcaatga 181
Query: 1248 ttttgataaggataaggaagaagattgttttgctgttaatcaattctgggcaatttatga 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttttgataaggataaggaagaagattgttttgctgttaatcaattctgggcaatttatga 241
Query: 1308 tagcactgatggcatgccaagattttatgctcttgtgaggaaagtggccaccccttttaa 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tagcactgatggcatgccaagattttatgctcttgtgaggaaagtggccaccccttttaa 301
Query: 1368 gttgaagatttcttggttggaacctgacccagatgatgaaggtgagatagattggcatga 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gttgaagatttcttggttggaacctgacccagatgatgaaggtgagatagattggcatga 361
Query: 1428 tgcagaattgcctattgcttgtggtaagttcaaacttggtggttctgagactgtaacaga 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgcagaattgcctattgcttgtggtaagttcaaacttggtggttctgagactgtaacaga 421
Query: 1488 tcgtactatgttctctcatcagatacagtgcatgaaaagaagttccaaaggttcttatta 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcgtactatgttctctcatcagatacagtgcatgaaaagaagttccaaaggttcttatta 481
Query: 1548 tatggtatatcccaagaagggagaaacttgggcacttttcagagattgggatatcaaatg 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatggtatatcccaagaagggagaaacttgggcacttttcagagattgggatatcaaatg 541
Query: 1608 gagtgctactccagaaaattatttgaagaatgagattgaatgtgttgaaatcctatcaga 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gagtgctactccagaaaattatttgaagaatgagattgaatgtgttgaaatcctatcaga 601
Query: 1668 ttttactgagaatgttggtattgaagttgctcacctagtcaaagtaaacgggtttgttag 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttttactgagaatgttggtattgaagttgctcacctagtcaaagtaaacgggtttgttag 661
Query: 1728 tctctttcagaaaactgagaagaatggagtcagtatatcttgtgttggacctaatgagct 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctctttcagaaaactgagaagaatggagtcagtatatcttgtgttggacctaatgagct 721
Query: 1788 ctacaggttctcacaccgtattccttcatataagacgacag 1828
||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 722 ctaca-gttctcacaccgta-tccttcatataagacgacag 760
>gnl|LJGI|AV780900
Length = 490
Score = 305 bits (154), Expect = 6e-82
Identities = 166/170 (97%)
Strand = Plus / Minus
Query: 1849 ccaagaggatgttttgaacttgacactgctgcattgcctacttacttctttgtcgttggt 1908
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ccaagaggatgttttgtacttgacactgctgcattgcctacttacttctttgtcgttggt 431
Query: 1909 gattctgaagatgctgaaagggatcctcaatcttggaaacatcaccaaagggacagaaca 1968
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 430 gattctgaagatgctgaaagggatcctcaatcttggaaacatcacccaagggacagaacc 371
Query: 1969 agtatgaacattggtcaacaaactgtaggtactgttgctgcatgttaggt 2018
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 370 agtatgaacattggtcaaccaactgtaggtactgttgctgcatgttaggt 321
>gnl|LJGI|TC58996 similar to UniRef100_A7QX12 Cluster: Chromosome chr14 scaffold_211,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_211, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 827
Score = 276 bits (139), Expect = 5e-73
Identities = 390/469 (83%), Gaps = 16/469 (3%)
Strand = Plus / Plus
Query: 1236 agatttcaatgattttgataaggataaggaagaagattgttttgctgttaatcaattctg 1295
||||||||| |||||||||||||| | || || ||||||||||||| ||||||||| ||
Sbjct: 316 agatttcaaagattttgataaggacagggg-gaggattgttttgctgctaatcaattttg 374
Query: 1296 ggcaatttatgatagcactgatggcatgccaagattttatgctcttgtgaggaaagtg-- 1353
||||||||||||| |||| ||| ||| ||||||| |||||| |||| |||||| ||
Sbjct: 375 agcaatttatgatatcactaatgacataccaagatattatgcgtttgtcaggaaattgta 434
Query: 1354 ----gccaccccttttaagttgaagatttcttggttggaacctgacccagatgatgaagg 1409
| | ||||||| |||||| |||||||||||||||| ||||||||| |||| ||||
Sbjct: 435 tgtagtctcccctttgaagttggagatttcttggttggagcctgacccaaatgaccaagg 494
Query: 1410 tgagatagattggcatgatgcagaattgcctattgcttgtggtaagttcaaacttggtgg 1469
|||| |||||| ||||| ||||| |||||||||||||||||||||||||| | |||
Sbjct: 495 ggagaaagattgccatgacgcagatttgcctattgcttgtggtaagttcaa---tagtga 551
Query: 1470 ttctgagactgtaacagatcgtactatgttctctcatcagatacagtgcatgaaaagaag 1529
|||| || ||| || |||| |||||| |||||||| |||||||| ||||||||||||||
Sbjct: 552 ttctcagcatgttactgatcttactatcttctctcaccagatacaatgcatgaaaagaag 611
Query: 1530 ttccaaaggttcttattatatggtatatcccaagaagggagaaacttgggcacttttcag 1589
| ||| |||| |||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 612 tggaaaaagttc---ttatatggcatatcccaagaagggagaaacttgggctattttcag 668
Query: 1590 agattgggatatcaaatggagtgctactccagaaaattatttgaagaatgagattgaatg 1649
||||||||||||||||||||| || |||||||||| |||| | |||| ||||||
Sbjct: 669 ggattgggatatcaaatggagttgtaatccagaaaatcattt--attgtgagtttgaata 726
Query: 1650 tgttgaaatcctatcaga-ttttactgagaatgttggtattgaagttgc 1697
||| |||||||||||||| |||| |||||||||||| |||| ||||||
Sbjct: 727 tgtagaaatcctatcagattttttatgagaatgttggcattgtagttgc 775
Score = 58.0 bits (29), Expect = 2e-07
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1143 tcaaggagagaaagtattggagtctgatcttgatgttagaagttcaaaagatgacaactg 1202
|||||||||||| ||||| |||| |||| | | ||||||| ||||||||||||||||
Sbjct: 199 tcaaggagagaatgtattagagttagatcctaaccttagaagctcaaaagatgacaactt 258
Query: 1203 ctctcaattgaat 1215
|||||| ||||||
Sbjct: 259 ctctcagttgaat 271
>gnl|LJGI|TC74494 similar to UniRef100_A2Q3G0 Cluster: Heat shock protein DnaJ; n=1;
Medicago truncatula|Rep: Heat shock protein DnaJ -
Medicago truncatula (Barrel medic), partial (4%)
Length = 572
Score = 81.8 bits (41), Expect = 2e-14
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 1776 acctaatgagctctacaggttctcacaccgtattccttcatataagacgacaggtaatga 1835
|||||||||||| ||| | || ||||| | |||||||| ||||||| ||| ||| ||||
Sbjct: 27 acctaatgagctataccgattttcacatcagattccttcgtataagatgactggtgatga 86
Query: 1836 aagggaaggtgttccaagaggatgttttgaacttgac 1872
||| ||||||||||||||||| | |||||||||||||
Sbjct: 87 aagagaaggtgttccaagaggttcttttgaacttgac 123
>gnl|LJGI|TC79100 weakly similar to UniRef100_Q5ZCV2 Cluster: DNAJ heat shock
N-terminal domain-containing protein-like; n=2; Oryza
sativa Japonica Group|Rep: DNAJ heat shock N-terminal
domain-containing protein-like - Oryza sativa subsp.
japonica (Rice), partial (16%)
Length = 887
Score = 67.9 bits (34), Expect = 2e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 281 tgcatcctgataaaaacaagttccctggtgcagaagctgctttcaagttcattgggga 338
|||||||||| ||||||||||| ||||||||||| ||||||| ||||| ||||||||
Sbjct: 454 tgcatcctgacaaaaacaagtttgctggtgcagaatctgcttttaagttgattgggga 511