Miyakogusa Predicted Gene
- Lj5g3v1427790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1427790.1 Non Chatacterized Hit- tr|C6T767|C6T767_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13231 PE,56.04,3e-18,no
description,PapD-like; coiled-coil,NULL; PapD-like,PapD-like;
seg,NULL; VESICLE-ASSOCIATED MEMBRA,CUFF.55246.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77023 weakly similar to UniRef100_A7QX01 Cluster: Chr... 1201 0.0
gnl|LJGI|TC67842 similar to UniRef100_A7QX00 Cluster: Chromosome... 117 2e-25
>gnl|LJGI|TC77023 weakly similar to UniRef100_A7QX01 Cluster: Chromosome chr14
scaffold_211, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_211, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (64%)
Length = 1041
Score = 1201 bits (606), Expect = 0.0
Identities = 612/614 (99%)
Strand = Plus / Plus
Query: 491 tgaagccgcaaaaagaattagagctagaagtgtcaaaagatctggattcaatcacagtaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagccgcaaaaagaattagagctagaagtgtcaaaagatctggattcaatcacagtaa 60
Query: 551 agaatgcagaggaattaaaaccaggaaaagaagctgagtttaaagtgtcaagagatccgg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatgcagaggaattaaaaccaggaaaagaagctgagtttaaagtgtcaagagatccgg 120
Query: 611 atttgaacaagataaacagagaagaggaactgaaaccaggaaaagatgttgagttgaaag 670
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttgaacacaataaacagagaagaggaactgaaaccaggaaaagatgttgagttgaaag 180
Query: 671 tgtcaaaagatctggatttgaacacaataaacagtgcagcggaactgaagccagaggaag 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtcaaaagatctggatttgaacacaataaacagtgcagcggaactgaagccagaggaag 240
Query: 731 aatcagagttaaacgtgtcaaaagatctggaggagtttaacactgtaaagaatgttcagg 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcagagttaaacgtgtcaaaagatctggaggagtttaacactgtaaagaatgttcagg 300
Query: 791 aactgaagccagaaaaagaagcaggcttacgagtttcaaagggtatagaggagctgaaat 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgaagccagaaaaagaagcaggcttacgagtttcaaagggtatagaggagctgaaat 360
Query: 851 taatggaagctattgaagagatgaagttaaaattagatggacttgaggcaaagctaaatg 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatggaagctattgaagagatgaagttaaaattagatggacttgaggcaaagctaaatg 420
Query: 911 agtctggaataacaatatcaaagttaacagaggagaggaggctaaacaatcaggaggcaa 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtctggaataacaatatcaaagttaacagaggagaggaggctaaacaatcaggaggcaa 480
Query: 971 agatcttgcaacaaaaactagacgatcttattaataaaggtcctagaaaagttcaagttg 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatcttgcaacaaaaactagacgatcttattaataaaggtcctagaaaagttcaagttg 540
Query: 1031 gatttccttttctatatgtctgcatggtggcgctcatctgtgtcttcttgggataccgtt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatttccttttctatatgtctgcatggtggcgctcatctgtgtcttcttgggataccgtt 600
Query: 1091 tacactcttgaatc 1104
||||||||||||||
Sbjct: 601 tacactcttgaatc 614
>gnl|LJGI|TC67842 similar to UniRef100_A7QX00 Cluster: Chromosome chr14 scaffold_211,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_211, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 670
Score = 117 bits (59), Expect = 2e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 atgcaagcccaacgggtagcgcctgaagatatggtgtgcaaggacaagttcttaattca 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgcaagcccaacgggtagcgcctgaagatatggtgtgcaaggacaagttcttaattca 666