Miyakogusa Predicted Gene
- Lj5g3v1427770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1427770.1 tr|B5X2T2|B5X2T2_SALSA Integral membrane protein
GPR175 OS=Salmo salar GN=GP175 PE=2 SV=1,24.6,0.00000009,seg,NULL;
Tmemb_40,Uncharacterised protein family, transmembrane-40; INTEGRAL
MEMBRANE PROTEIN GPR17,CUFF.55287.1
(903 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75917 similar to UniRef100_A7QWZ7 Cluster: Chromosome... 1790 0.0
gnl|LJGI|TC70364 weakly similar to UniRef100_A7QWZ7 Cluster: Chr... 72 7e-12
>gnl|LJGI|TC75917 similar to UniRef100_A7QWZ7 Cluster: Chromosome chr14 scaffold_211,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_211, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1295
Score = 1790 bits (903), Expect = 0.0
Identities = 903/903 (100%)
Strand = Plus / Plus
Query: 1 atggttcaacaatcggtgctagcaataacaaagcaagagggttcagattcttctacaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggttcaacaatcggtgctagcaataacaaagcaagagggttcagattcttctacaagc 249
Query: 61 gcagcgttatccgcgggaatgttcgactgggtgttcaagtgccatgggttctggcacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcagcgttatccgcgggaatgttcgactgggtgttcaagtgccatgggttctggcacaat 309
Query: 121 gcggtgttgatcatcgcctctttcctcttcgtcttgtacttggcattgcaagcgaagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcggtgttgatcatcgcctctttcctcttcgtcttgtacttggcattgcaagcgaagcag 369
Query: 181 agcttccgcaagctctctcatggtcgctcgcatattataatctcgtattacgccaccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agcttccgcaagctctctcatggtcgctcgcatattataatctcgtattacgccaccctc 429
Query: 241 tggcttgtcagcatcctcaatcttgcttggtgttcttttcaggtatgggagtgctctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tggcttgtcagcatcctcaatcttgcttggtgttcttttcaggtatgggagtgctctcct 489
Query: 301 gggaaagagcttgcatggaacttgttatccttgtttacttcatctggaatgctgtttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gggaaagagcttgcatggaacttgttatccttgtttacttcatctggaatgctgtttcta 549
Query: 361 gaagtgagcttgctggcttttttacttcaagggaataatgctagtggcttagaagcgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaagtgagcttgctggcttttttacttcaagggaataatgctagtggcttagaagcgttg 609
Query: 421 acccggacttttggtatatcaggggtcattgttggttttgacatcttgttaaagggtata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acccggacttttggtatatcaggggtcattgttggttttgacatcttgttaaagggtata 669
Query: 481 tatctttttgcatttgggatcccgttattcatcgacaccgatcacagtattcctcacgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tatctttttgcatttgggatcccgttattcatcgacaccgatcacagtattcctcacgtg 729
Query: 541 aagtggaacttgtgggttgttcacaagctggtgctcacccttgtttatggattaatattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aagtggaacttgtgggttgttcacaagctggtgctcacccttgtttatggattaatattg 789
Query: 601 ttcatgtatcattctaggtggagagaaaggttacctgcaagacctgcgttctacaagtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttcatgtatcattctaggtggagagaaaggttacctgcaagacctgcgttctacaagtat 849
Query: 661 gttactgttatgttcatcttgaatgcaattgcactttttgcttgtggtctaactggaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gttactgttatgttcatcttgaatgcaattgcactttttgcttgtggtctaactggaagt 909
Query: 721 ggagctgcttttggtttctggttctatcgcgtcacagttgtatgttaccacgccttttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ggagctgcttttggtttctggttctatcgcgtcacagttgtatgttaccacgccttttat 969
Query: 781 cttcctctgctgtatataacatttctagcagactttttccaggaggaggacttgaacttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 cttcctctgctgtatataacatttctagcagactttttccaggaggaggacttgaacttg 1029
Query: 841 gagaatgtgtattactctgaaatgaaagatgctggtttcttcgaatcagattggaactaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 gagaatgtgtattactctgaaatgaaagatgctggtttcttcgaatcagattggaactaa 1089
Query: 901 tgt 903
|||
Sbjct: 1090 tgt 1092
>gnl|LJGI|TC70364 weakly similar to UniRef100_A7QWZ7 Cluster: Chromosome chr14
scaffold_211, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_211, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (76%)
Length = 1196
Score = 71.9 bits (36), Expect = 7e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 790 ctgtatataacatttctagcagactttttccaggaggaggacttgaacttggagaatgtg 849
|||||| |||| ||||||||||| |||||||||||||| || || ||||| || |
Sbjct: 892 ctgtatgtaacttttctagcagattttttccaggaggaagatttccttttggataacgca 951
Query: 850 tattactctgaaatgaaagatgctggtttctt 881
|||||||||||||||||||||||||| |||||
Sbjct: 952 tattactctgaaatgaaagatgctggattctt 983