Miyakogusa Predicted Gene

Lj5g3v1427750.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1427750.1 CUFF.55352.1
         (447 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77065 homologue to UniRef100_Q0IJ87 Cluster: Sodium/h...   301   2e-81
gnl|LJGI|BG662399 similar to UniRef100_A7PSF1 Cluster: Sodium/hy...    52   3e-06

>gnl|LJGI|TC77065 homologue to UniRef100_Q0IJ87 Cluster: Sodium/hydrogen exchanger;
           n=1; Glycine max|Rep: Sodium/hydrogen exchanger -
           Glycine max (Soybean), partial (36%)
          Length = 591

 Score =  301 bits (152), Expect = 2e-81
 Identities = 158/160 (98%)
 Strand = Plus / Plus

                                                                       
Query: 28  ttagcttatctaagaggaattctcaccgtattcttttgtgggattgttatgtctcattat 87
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttagcttatctgagtggaattctcaccgtattcttttgtgggattgttatgtctcattat 487

                                                                       
Query: 88  acttggcataatgtgactgagagttcaagaatcactaccaagcacgcctttgctaccttg 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acttggcataatgtgactgagagttcaagaatcactaccaagcacgcctttgctaccttg 547

                                                   
Query: 148 tcgtttgttgctgagaccttcatcttcctttatgttggga 187
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcgtttgttgctgagaccttcatcttcctttatgttggga 587


>gnl|LJGI|BG662399 similar to UniRef100_A7PSF1 Cluster: Sodium/hydrogen exchanger;
           n=1; Vitis vinifera|Rep: Sodium/hydrogen exchanger -
           Vitis vinifera (Grape), partial (18%)
          Length = 343

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 281 ttggaagagcagcttttgttttccct 306
           ||||||||||||||||||||||||||
Sbjct: 66  ttggaagagcagcttttgttttccct 91