Miyakogusa Predicted Gene

Lj5g3v1425440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1425440.1 CUFF.55239.1
         (438 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63996 similar to UniRef100_Q6ZZ86 Cluster: 50S riboso...   868   0.0  

>gnl|LJGI|TC63996 similar to UniRef100_Q6ZZ86 Cluster: 50S ribosomal protein L34;
           n=1; Cicer arietinum|Rep: 50S ribosomal protein L34 -
           Cicer arietinum (Chickpea) (Garbanzo), partial (87%)
          Length = 720

 Score =  868 bits (438), Expect = 0.0
 Identities = 438/438 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtccaagacgcttctgagaagtggatctacattgctgaatcgcttttcaaattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggcgtccaagacgcttctgagaagtggatctacattgctgaatcgcttttcaaattca 173

                                                                       
Query: 61  aaatcgcttctcaacccaaatttgcatcccaatcaccctcttcctcagctattccaaatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aaatcgcttctcaacccaaatttgcatcccaatcaccctcttcctcagctattccaaatc 233

                                                                       
Query: 121 ccacccctctctaagctccccagtttcccccaaaacgacgccgattcacccagcaagctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ccacccctctctaagctccccagtttcccccaaaacgacgccgattcacccagcaagctt 293

                                                                       
Query: 181 ctcgcctcccaagggttcctctacccgtgtggcctccctgatctcagcttcttcctacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctcgcctcccaagggttcctctacccgtgtggcctccctgatctcagcttcttcctacct 353

                                                                       
Query: 241 caagccacagtcgatgtatcctatgagtgtccttccaatgaagaagaccctatgctttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 caagccacagtcgatgtatcctatgagtgtccttccaatgaagaagaccctatgctttta 413

                                                                       
Query: 301 ttccccaaaaggagctatcaacccagcactctccgacgaaagcgggttcatggatttttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttccccaaaaggagctatcaacccagcactctccgacgaaagcgggttcatggatttttt 473

                                                                       
Query: 361 gctcggaaggcaaccaagggtggcagaagagtaattgctcgtagaatagccaagggtagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gctcggaaggcaaccaagggtggcagaagagtaattgctcgtagaatagccaagggtagg 533

                             
Query: 421 tcaaggattacagcttag 438
           ||||||||||||||||||
Sbjct: 534 tcaaggattacagcttag 551