Miyakogusa Predicted Gene

Lj5g3v1415300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1415300.1 Non Chatacterized Hit- tr|F6GSN7|F6GSN7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.81,0.00000000000008, ,gene.g61674.t1.1
         (1353 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82696 similar to UniRef100_A7QHY5 Cluster: Chromosome...   216   3e-55
gnl|LJGI|BP055644 weakly similar to UniRef100_A9RGE6 Cluster: Pr...   184   1e-45
gnl|LJGI|TC80541                                                       58   1e-07
gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome...    58   1e-07
gnl|LJGI|TC63699                                                       58   1e-07
gnl|LJGI|BP057320                                                      54   2e-06
gnl|LJGI|TC81515                                                       54   2e-06

>gnl|LJGI|TC82696 similar to UniRef100_A7QHY5 Cluster: Chromosome chr17 scaffold_101,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_101, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (15%)
          Length = 741

 Score =  216 bits (109), Expect = 3e-55
 Identities = 130/137 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1217 tgataggaacccaattgttagggatatgcccaatactactagagtccatggaagtaagag 1276
            |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 174  tgataggaacccaattgttagggataggcccaatactactagagtccatagaagtaagag 115

                                                                        
Query: 1277 gaagaggtgcaatgcaccaaatcaattcccacgagaggtgtaaccacctactgaggtggc 1336
            |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||
Sbjct: 114  gaagaggtgcaatgcaccaattcaattctcacgagaggtgtaaccacctgctgaggtggc 55

                             
Query: 1337 atgagttgtgcaggtag 1353
            ||||| ||| |||||||
Sbjct: 54   atgagctgtacaggtag 38


>gnl|LJGI|BP055644 weakly similar to UniRef100_A9RGE6 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (9%)
          Length = 551

 Score =  184 bits (93), Expect = 1e-45
 Identities = 126/137 (91%)
 Strand = Plus / Minus

                                                                        
Query: 1217 tgataggaacccaattgttagggatatgcccaatactactagagtccatggaagtaagag 1276
            |||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||
Sbjct: 346  tgataggaacccaattattaggaataggcccaatactactagagtccatgaaagtaagag 287

                                                                        
Query: 1277 gaagaggtgcaatgcaccaaatcaattcccacgagaggtgtaaccacctactgaggtggc 1336
            |||||||||||||||||||||||  |||||  |||||| |||||| ||| ||||||||||
Sbjct: 286  gaagaggtgcaatgcaccaaatcttttcccttgagaggagtaaccgcctgctgaggtggc 227

                             
Query: 1337 atgagttgtgcaggtag 1353
            |||||||||||||||||
Sbjct: 226  atgagttgtgcaggtag 210


>gnl|LJGI|TC80541 
          Length = 783

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 1177 tccatccttgaggacaaggatgttttgaagggg 1209
            |||||||||||||||||||||||||| ||||||
Sbjct: 434  tccatccttgaggacaaggatgttttcaagggg 466


>gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome c assembly protein;
            n=1; Desulfuromonas acetoxidans DSM 684|Rep: Cytochrome c
            assembly protein - Desulfuromonas acetoxidans DSM 684,
            partial (6%)
          Length = 1236

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 1177 tccatccttgaggacaaggatgttttgaagggg 1209
            |||||||||||||||||||||||||| ||||||
Sbjct: 938  tccatccttgaggacaaggatgttttcaagggg 970


>gnl|LJGI|TC63699 
          Length = 738

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 1177 tccatccttgaggacaaggatgttttgaagggg 1209
            |||||||||||||||||||||||||| ||||||
Sbjct: 453  tccatccttgaggacaaggatgttttcaagggg 485


>gnl|LJGI|BP057320 
          Length = 420

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 1179 catccttgaggacaaggatgttttgaagggg 1209
            |||||||||||||||||||||||| ||||||
Sbjct: 255  catccttgaggacaaggatgttttcaagggg 225


>gnl|LJGI|TC81515 
          Length = 474

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 1179 catccttgaggacaaggatgttttgaagggg 1209
            |||||||||||||||||||||||| ||||||
Sbjct: 184  catccttgaggacaaggatgttttcaagggg 214