Miyakogusa Predicted Gene

Lj5g3v1414150.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1414150.1 Non Chatacterized Hit- tr|A9NW78|A9NW78_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.9,4e-19,seg,NULL,CUFF.55222.1
         (630 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61341 weakly similar to UniRef100_A7NWT1 Cluster: Chr...  1249   0.0  

>gnl|LJGI|TC61341 weakly similar to UniRef100_A7NWT1 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 951

 Score = 1249 bits (630), Expect = 0.0
 Identities = 630/630 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttcctccagattgttgggtcttacagccatgcttctcttggtgcttctccccatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  atgggttcctccagattgttgggtcttacagccatgcttctcttggtgcttctccccatg 133

                                                                       
Query: 61  gctgccaaaggggatattgttgatgatattcttgacaaggtttgtgaagaagtggaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gctgccaaaggggatattgttgatgatattcttgacaaggtttgtgaagaagtggaatgt 193

                                                                       
Query: 121 gggaaaggaaagtgcgtggtaaacacaacttacccattgaacttcatctgtgaatgtgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gggaaaggaaagtgcgtggtaaacacaacttacccattgaacttcatctgtgaatgtgag 253

                                                                       
Query: 181 tctggctggaagagaactagagacgaggacagtgacaaatatggcactagctttcttcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tctggctggaagagaactagagacgaggacagtgacaaatatggcactagctttcttcca 313

                                                                       
Query: 241 tgtgtcattccccagtgtagcttaaactatggttgccagccagcaccacctccagttcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgtgtcattccccagtgtagcttaaactatggttgccagccagcaccacctccagttcca 373

                                                                       
Query: 301 gagaagagtctaccacataacttatcagcttttgacccttgctattgggcgtactgtggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gagaagagtctaccacataacttatcagcttttgacccttgctattgggcgtactgtggg 433

                                                                       
Query: 361 gaaggaaaatgcatcacgaacagaacatatacatacggatgcgagtgcagccccaatttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaaggaaaatgcatcacgaacagaacatatacatacggatgcgagtgcagccccaatttt 493

                                                                       
Query: 421 tacaatcttctcaacatctctgtcttcccttgttacagtgaatgtactcttggatctgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tacaatcttctcaacatctctgtcttcccttgttacagtgaatgtactcttggatctgat 553

                                                                       
Query: 481 tgttcaagacttggaatcaaagttgcaaattcaacaggagactcaactggtgacagtggc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgttcaagacttggaatcaaagttgcaaattcaacaggagactcaactggtgacagtggc 613

                                                                       
Query: 541 actagtctagcaagctcaatcttaccaggaggaagtttccaatggatggttatgttgttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 actagtctagcaagctcaatcttaccaggaggaagtttccaatggatggttatgttgttg 673

                                         
Query: 601 atgtcaacgggtatggttatgtggagctag 630
           ||||||||||||||||||||||||||||||
Sbjct: 674 atgtcaacgggtatggttatgtggagctag 703