Miyakogusa Predicted Gene

Lj5g3v1414130.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1414130.1 tr|I0YMG8|I0YMG8_9CHLO DUF1000-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,66.15,4e-18,THIOREDOXIN - RELATED,NULL;
THIOREDOXIN-RELATED,Thioredoxin; Galactose-binding
domain-like,Galactose,CUFF.55221.1
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58734 similar to UniRef100_Q9SQZ9 Cluster: UPF0424 pr...   476   e-134

>gnl|LJGI|TC58734 similar to UniRef100_Q9SQZ9 Cluster: UPF0424 protein At3g04780;
           n=1; Arabidopsis thaliana|Rep: UPF0424 protein At3g04780
           - Arabidopsis thaliana (Mouse-ear cress), complete
          Length = 929

 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccggtgaatctgccagcgctattcaaaagggtcaagttgatctcttagacttcata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgtccggtgaatctgccagcgctattcaaaagggtcaagttgatctcttagacttcata 205

                                                                       
Query: 61  gactggtctagtgttgaatgcctcaatcagagttccacccactctctccccaatgctatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gactggtctagtgttgaatgcctcaatcagagttccacccactctctccccaatgctatc 265

                                                                       
Query: 121 aaacaggggtatagagaagatgatggtttgcatctggagagtgatgctgatgagcagctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaacaggggtatagagaagatgatggtttgcatctggagagtgatgctgatgagcagctt 325

                                                                       
Query: 181 ttgctctatattcctttcactcaagtcattaaactctctgccattcttatcaaaggccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgctctatattcctttcactcaagtcattaaactctctgccattcttatcaaaggccct 385