Miyakogusa Predicted Gene
- Lj5g3v1412970.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1412970.2 Non Chatacterized Hit- tr|C0JP10|C0JP10_LOTJA
Putative basic helix-loop-helix protein BHLH2
OS=Lotus,99.12,0,HLH,Helix-loop-helix domain; seg,NULL; no
description,Helix-loop-helix domain; HLH,
helix-loop-helix,CUFF.55257.2
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59454 similar to UniRef100_A7Q620 Cluster: Chromosome... 1927 0.0
gnl|LJGI|TC75859 similar to UniRef100_A7PUK8 Cluster: Chromosome... 119 4e-26
gnl|LJGI|TC72186 homologue to UniRef100_A7PUK8 Cluster: Chromoso... 100 3e-20
gnl|LJGI|TC69418 similar to UniRef100_A7PUK8 Cluster: Chromosome... 88 1e-16
>gnl|LJGI|TC59454 similar to UniRef100_A7Q620 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1699
Score = 1927 bits (972), Expect = 0.0
Identities = 1010/1029 (98%)
Strand = Plus / Plus
Query: 1 atggtgtcggaggggttaggggatgatttcttggagcagatcttggcggtgccggaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atggtgtcggaggggttaggggatgatttcttggagcagatcttggcggtgccggaggcc 349
Query: 61 tatggcaggacggtggtgggcgacggaggagtgttgcagctgggtttnnnnnnnnnnnnn 120
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tatggcaggacggtggtgggcgacggaggagtgttgcagctgggtttgagaggaggagga 409
Query: 121 nnnnnnatccctctgggattgaatttggaacaatctgcgtttctcacacaccaccaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggaggaatccctctgggattgaatttggaacaatctgcgtttctcacacaccaccaagat 469
Query: 181 acacgcttcattgacaacaacaacagcaacaacattaatagtaataaccatcaccaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acacgcttcattgacaacaacaacagcaacaacattaatagtaataaccatcaccaccaa 529
Query: 241 catcaccagcttagtctcaataatcatcatcatcacagtgaaaactatgccacctcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 catcaccagcttagtctcaataatcatcatcatcacagtgaaaactatgccacctcttca 589
Query: 301 tcttcctcttcaatcactgatcgggaatcgatgcagatgaggggtttgtttccaacgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcttcctcttcaatcactgatcgggaatcgatgcagatgaggggtttgtttccaacgttc 649
Query: 361 ggacaattgcatactcctactcatgctccctctgtccgccccactctgccaccgccttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ggacaattgcatactcctactcatgctccctctgtccgccccactctgccaccgccttct 709
Query: 421 cagccccaactccacctccaccaccagcaccaacaccatcatcagccccttcaaaaccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cagccccaactccacctccaccaccagcaccaacaccatcatcagccccttcaaaaccag 769
Query: 481 caaccaactccagcttctaatgctcatatgcaacatccacctggcatccgccctagagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 caaccaactccagcttctaatgctcatatgcaacatccacctggcatccgccctagagtg 829
Query: 541 agagcaagaagaggccaagccactgaccctcacagtatagctgagcggttacgtcgtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 agagcaagaagaggccaagccactgaccctcacagtatagctgagcggttacgtcgtgaa 889
Query: 601 agaatcgctgaaagaatgagggcattgcaggaattagtccccagcatcaacaagtcggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 agaatcgctgaaagaatgagggcattgcaggaattagtccccagcatcaacaagtcggac 949
Query: 661 agagctgcgatgcttgatgaaattgtggattatgtgaagttcctaaggctccaggttaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 agagctgcgatgcttgatgaaattgtggattatgtgaagttcctaaggctccaggttaag 1009
Query: 721 gtgttgagcatgagtagactgggtggagctggtgcagttgctcaacttgtagctgatgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 gtgttgagcatgagtagactgggtggagctggtgcagttgctcaacttgtagctgatgtt 1069
Query: 781 cccctttcagcagtggagggggaagatatagaaggtggagccagtgagcaagcttggtcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 cccctttcagcagtggagggggaagatatagaaggtggagccagtgagcaagcttggtcc 1129
Query: 841 aagtggtccaacgatggcacagaacaacaagtggctaaacttatggaagaagatgttgga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 aagtggtccaacgatggcacagaacaacaagtggctaaacttatggaagaagatgttgga 1189
Query: 901 gcagctatgcaatttcttcagtccaaggcactctgtatcatgccaatatcactagcctca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 gcagctatgcaatttcttcagtccaaggcactctgtatcatgccaatatcactagcctca 1249
Query: 961 gctatttttcgcatgccacaatcagaagcatcaacaacaatcaagcctgaatcagacagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 gctatttttcgcatgccacaatcagaagcatcaacaacaatcaagcctgaatcagacagc 1309
Query: 1021 cagacatag 1029
|||||||||
Sbjct: 1310 cagacatag 1318
>gnl|LJGI|TC75859 similar to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 911
Score = 119 bits (60), Expect = 4e-26
Identities = 233/288 (80%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 676 gatgaaattgtggattatgtgaagttcctaaggctccaggttaaggtgttgagcatgagt 735
|||||||| |||||||||||||||||| ||||||| || || ||||| ||||||||||||
Sbjct: 8 gatgaaatagtggattatgtgaagttcttaaggcttcaagtgaaggttttgagcatgagt 67
Query: 736 agactgggtggagctggtgcagttgctcaacttgtagctgatgttcccctttcagcagtg 795
||| |||| ||||| |||||||| || | ||| ||| ||||| | || | || |||||
Sbjct: 68 agattgggcggagcaggtgcagtggcaccactggtaactgatatcccattatcgtcagtg 127
Query: 796 gagggggaagatatagaaggtg-gagccagtgagcaagcttggtccaagtggtccaacga 854
|||| |||| ||||||| ||| | || || |||||| ||||||||| || ||
Sbjct: 128 gaggaagaaggcggtgaaggtgcgagaaaccgacca-gcttgggacaagtggtcaaatga 186
Query: 855 tggcacagaacaacaagtggctaaacttatggaagaagatgttggagcagctatgcaatt 914
||| |||||| |||| || ||||| |||||||||||| ||||||| || || ||||||||
Sbjct: 187 tggtacagaaaaacaggtagctaagcttatggaagaaaatgttggggctgccatgcaatt 246
Query: 915 tcttcagtccaaggcactctgtatcatgccaatatcactagcctcagc 962
|||||| || ||||||||||| |||||||| || ||||| || |||||
Sbjct: 247 tcttcaatcaaaggcactctgcatcatgcccatctcactggcatcagc 294
>gnl|LJGI|TC72186 homologue to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 1552
Score = 99.6 bits (50), Expect = 3e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 661 agagctgcgatgcttgatgaaattgtggattatgtgaagttcctaaggctccaggttaag 720
||||||| ||||| |||||||||||||||||||| |||||| ||||||| || || |||
Sbjct: 662 agagctgtcatgctggatgaaattgtggattatgtcaagttcttaaggcttcaagtgaag 721
Query: 721 gtgttgagcatgagtagactgggtggagctggtgcagt 758
|| |||||||||||||| | |||||||||||||||||
Sbjct: 722 gttctgagcatgagtagattaggtggagctggtgcagt 759
>gnl|LJGI|TC69418 similar to UniRef100_A7PUK8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 906
Score = 87.7 bits (44), Expect = 1e-16
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 598 gaaagaatcgctgaaagaatgagggcattgcaggaattagtccccagcatcaacaagtcg 657
|||||||| || |||||||| ||||||| ||| || | || || || |||||||| |
Sbjct: 586 gaaagaatagcagaaagaattagggcatagcaagagctggttccaagtgtcaacaagact 645
Query: 658 gacagagctgcgatgcttgatgaaattgtggattatgtgaagttcctaaggctccaggtt 717
|| ||||| || ||| | |||||||| |||||||||||||||||| ||||||| || ||
Sbjct: 646 gatagagccgccatgttagatgaaatagtggattatgtgaagttcttaaggcttcaagtg 705
Query: 718 aaggtgttgagcatgagtagactgggtggagc 749
||||| ||||||||||||||| |||| |||||
Sbjct: 706 aaggttttgagcatgagtagattgggcggagc 737
Score = 52.0 bits (26), Expect = 7e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 840 caagtggtccaacgatggcacagaacaacaagtggctaaacttatggaagaagatgttgg 899
||||||||| | ||||| |||||| |||| || ||||| |||||||||||| | |||||
Sbjct: 829 caagtggtcaagtgatggtacagaaaaacaggtagctaagcttatggaagaaaaggttgg 888
Query: 900 agcagctatgcaatttct 917
|| || |||||||||||
Sbjct: 889 ggctgccatgcaatttct 906