Miyakogusa Predicted Gene
- Lj5g3v1381560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1381560.1 Non Chatacterized Hit- tr|D7TXI7|D7TXI7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,39.16,3e-19,
,CUFF.55220.1
(511 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61105 weakly similar to UniRef100_A7QMQ2 Cluster: Chr... 948 0.0
gnl|LJGI|GO035676 similar to UniRef100_Q27IQ1 Cluster: Neurofila... 490 e-138
gnl|LJGI|FS343118 weakly similar to UniRef100_A7QMQ2 Cluster: Ch... 88 6e-17
gnl|LJGI|FS328355 similar to UniRef100_A7QMQ2 Cluster: Chromosom... 88 6e-17
gnl|LJGI|TC61086 similar to UniRef100_Q10C08 Cluster: Targeting ... 88 6e-17
>gnl|LJGI|TC61105 weakly similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 1554
Score = 948 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Plus
Query: 12 catcatggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 catcatggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaat 134
Query: 72 agccgcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagt 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 agccgcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagt 194
Query: 132 taaggctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 taaggctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttga 254
Query: 192 gaagtgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgactt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaagtgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgactt 314
Query: 252 acctgagaaggagatcgagaaatctgaagtgcagaaattggatgacagtaaaaagttaac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acctgagaaggagatcgagaaatctgaagtgcagaaattggatgacagtaaaaagttaac 374
Query: 312 ctcgcctgctgcaagaaaagagcatacaaatcactctgtttctcagccatctgatttggt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctcgcctgctgcaagaaaagagcatacaaatcactctgtttctcagccatctgatttggt 434
Query: 372 tactgaaaggcaaggatcctacacacagattgttgatactaaagctgttgcaacaggtct 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tactgaaaggcaaggatcctacacacagattgttgatactaaagctgttgcaacaggtct 494
Query: 432 gaacttgtcaccaaatgctaacagcatgcagtcaccttactcatcaaagaactcgcag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaacttgtcaccaaatgctaacagcatgcagtcaccttactcatcaaagaactcgcag 552
>gnl|LJGI|GO035676 similar to UniRef100_Q27IQ1 Cluster: Neurofilament subunit NF-132;
n=1; Petromyzon marinus|Rep: Neurofilament subunit
NF-132 - Petromyzon marinus (Sea lamprey), partial (4%)
Length = 532
Score = 490 bits (247), Expect = e-138
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 11 gcatcatggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcatcatggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaa 345
Query: 71 tagccgcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tagccgcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcag 405
Query: 131 ttaaggctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttaaggctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttg 465
Query: 191 agaagtgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgact 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agaagtgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgact 525
Query: 251 tacctga 257
|||||||
Sbjct: 526 tacctga 532
>gnl|LJGI|FS343118 weakly similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 738
Score = 87.7 bits (44), Expect = 6e-17
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 355 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 414
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 356 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 415
Query: 415 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 474
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 416 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 475
Query: 475 tcaaagaa 482
||||||||
Sbjct: 476 tcaaagaa 483
>gnl|LJGI|FS328355 similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 736
Score = 87.7 bits (44), Expect = 6e-17
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 355 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 414
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 431 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 490
Query: 415 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 474
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 491 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 550
Query: 475 tcaaagaa 482
||||||||
Sbjct: 551 tcaaagaa 558
>gnl|LJGI|TC61086 similar to UniRef100_Q10C08 Cluster: Targeting protein for Xklp2
containing protein, expressed; n=2; Oryza sativa
Japonica Group|Rep: Targeting protein for Xklp2
containing protein, expressed - Oryza sativa subsp.
japonica (Rice), partial (34%)
Length = 1429
Score = 87.7 bits (44), Expect = 6e-17
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 355 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 414
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 361 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 420
Query: 415 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 474
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 421 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 480
Query: 475 tcaaagaa 482
||||||||
Sbjct: 481 tcaaagaa 488