Miyakogusa Predicted Gene
- Lj5g3v1381550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1381550.1 Non Chatacterized Hit- tr|I1Q5S8|I1Q5S8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.1,8e-19,TPX2,Xklp2 targeting protein; coiled-coil,NULL;
seg,NULL,CUFF.55219.1
(786 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61105 weakly similar to UniRef100_A7QMQ2 Cluster: Chr... 1516 0.0
gnl|LJGI|GO035676 similar to UniRef100_Q27IQ1 Cluster: Neurofila... 480 e-135
gnl|LJGI|TC61086 similar to UniRef100_Q10C08 Cluster: Targeting ... 289 1e-77
gnl|LJGI|FS343118 weakly similar to UniRef100_A7QMQ2 Cluster: Ch... 234 7e-61
gnl|LJGI|FS328355 similar to UniRef100_A7QMQ2 Cluster: Chromosom... 184 6e-46
>gnl|LJGI|TC61105 weakly similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 1554
Score = 1516 bits (765), Expect = 0.0
Identities = 779/786 (99%)
Strand = Plus / Plus
Query: 1 atggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaatagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaatagcc 138
Query: 61 gcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagttaag 198
Query: 121 gctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttgagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttgagaag 258
Query: 181 tgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgacttacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgacttacct 318
Query: 241 gagaaggagatcgagaaatctgaagtgcagaaattggatgacagtaaaaagttaacctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gagaaggagatcgagaaatctgaagtgcagaaattggatgacagtaaaaagttaacctcg 378
Query: 301 cctgctgcaagaaaagagcatacaaatcactctgtttctcagccatctgatttggttact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cctgctgcaagaaaagagcatacaaatcactctgtttctcagccatctgatttggttact 438
Query: 361 gaaaggcaaggatcctacacacagattgttgatactaaagctgttgcaacaggtctgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaaaggcaaggatcctacacacagattgttgatactaaagctgttgcaacaggtctgaac 498
Query: 421 ttgtcaccaaatgctaacagcatgcagtcaccttactcatcaaagaactcgcagccaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgtcaccaaatgctaacagcatgcagtcaccttactcatcaaagaactcgcagccaaac 558
Query: 481 acaccattttcatcaagtaagcccttgcaacttgatgataagaagaactatgatgatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acaccattttcatcaagtaagcccttgcaacttgatgataagaagaactatgatgatgaa 618
Query: 541 gataactggtctcttgcttcctctgctttttctatgcgcactgctagatctaaggtaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gataactggtctcttgcttcctctgctttttctatgcgcactgctagatctaaggtaact 678
Query: 601 cagggttcagcccctacatttaaatgctcagcacgcgcagagaaacggaaagagtattat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cagggttcagcccctacatttaaatgctcagcacgcgcagagaaacggaaagagtattat 738
Query: 661 ctgaaattagaggagaaaaaacaagctcttcaagaagnnnnnnnccagtatgaggcaagg 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 739 ctgaaattagaggagaaaaaacaagctcttcaagaagaaaaaaaccagtatgaggcaagg 798
Query: 721 caaaaggaagagcaagaagcagccatcaagcagttgagaaagaacttggtgattagagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caaaaggaagagcaagaagcagccatcaagcagttgagaaagaacttggtgattagagca 858
Query: 781 aaacca 786
||||||
Sbjct: 859 aaacca 864
>gnl|LJGI|GO035676 similar to UniRef100_Q27IQ1 Cluster: Neurofilament subunit NF-132;
n=1; Petromyzon marinus|Rep: Neurofilament subunit
NF-132 - Petromyzon marinus (Sea lamprey), partial (4%)
Length = 532
Score = 480 bits (242), Expect = e-135
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 atggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaatagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atggggagagaagtttcagaaacacaggttgtggacaagaagccaaatggcgtaatagcc 350
Query: 61 gcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gcttcaaatggtgattctaatgataaagcacacatttcttctaaaattgcagcagttaag 410
Query: 121 gctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttgagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gctgaagcaaaggatcatgaggtaaaggaatgtaccaaagacaacgattttgttgagaag 470
Query: 181 tgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgacttacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgccatgagaagaaggatgttctgagcgccaaaaccacaaactgtaatactgacttacct 530
Query: 241 ga 242
||
Sbjct: 531 ga 532
>gnl|LJGI|TC61086 similar to UniRef100_Q10C08 Cluster: Targeting protein for Xklp2
containing protein, expressed; n=2; Oryza sativa
Japonica Group|Rep: Targeting protein for Xklp2
containing protein, expressed - Oryza sativa subsp.
japonica (Rice), partial (34%)
Length = 1429
Score = 289 bits (146), Expect = 1e-77
Identities = 370/447 (82%)
Strand = Plus / Plus
Query: 340 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 399
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 361 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 420
Query: 400 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 459
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 421 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 480
Query: 460 tcaaagaactcgcagccaaacacaccattttcatcaagtaagcccttgcaacttgatgat 519
|||||||| || ||||| |||||||| |||||||||| |||||||||| || |||||||
Sbjct: 481 tcaaagaattcacagccgaacacacctttttcatcaaagaagcccttgccacatgatgat 540
Query: 520 aagaagaactatgatgatgaagataactggtctcttgcttcctctgctttttctatgcgc 579
|||||| || |||||||||||||||| |||||| || ||||||| ||| ||| |||
Sbjct: 541 aagaagcaccatgatgatgaagataattggtctgttacttcctccgctgcatctgcacgc 600
Query: 580 actgctagatctaaggtaactcagggttcagcccctacatttaaatgctcagcacgcgca 639
|| ||||||||||| || ||| |||||||| |||||||||| ||||| | || |||
Sbjct: 601 accgctagatctaaagtcactgttggttcagcacctacatttagatgctacgatcgtgca 660
Query: 640 gagaaacggaaagagtattatctgaaattagaggagaaaaaacaagctcttcaagaagnn 699
||||||||||| |||| |||| ||||||||||||||||||| | ||||||| ||||||
Sbjct: 661 gagaaacggaaggagttttatatgaaattagaggagaaaaatcgagctcttgaagaagaa 720
Query: 700 nnnnnccagtatgaggcaaggcaaaaggaagagcaagaagcagccatcaagcagttgaga 759
|||||||||||||||| |||||||||| | |||||||| | ||||||||||||
Sbjct: 721 aaaatgcagtatgaggcaaggcgaaaggaagaggagcaagcagcccttaagcagttgaga 780
Query: 760 aagaacttggtgattagagcaaaacca 786
||||| ||||| |||| ||||||||||
Sbjct: 781 aagaatttggtcattaaagcaaaacca 807
>gnl|LJGI|FS343118 weakly similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 738
Score = 234 bits (118), Expect = 7e-61
Identities = 298/358 (83%)
Strand = Plus / Plus
Query: 340 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 399
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 356 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 415
Query: 400 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 459
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 416 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 475
Query: 460 tcaaagaactcgcagccaaacacaccattttcatcaagtaagcccttgcaacttgatgat 519
|||||||| || ||||| |||||||| |||||||||| |||||||||| || |||||||
Sbjct: 476 tcaaagaattcacagccgaacacacctttttcatcaaagaagcccttgccacatgatgat 535
Query: 520 aagaagaactatgatgatgaagataactggtctcttgcttcctctgctttttctatgcgc 579
|||||| || |||||||||||||||| |||||| || ||||||| ||| ||| |||
Sbjct: 536 aagaagcaccatgatgatgaagataattggtctgttacttcctccgctgcatctgcacgc 595
Query: 580 actgctagatctaaggtaactcagggttcagcccctacatttaaatgctcagcacgcgca 639
|| ||||||||||| || ||| |||||||| |||||||||| ||||| | || |||
Sbjct: 596 accgctagatctaaagtcactgttggttcagcacctacatttagatgctacgatcgtgca 655
Query: 640 gagaaacggaaagagtattatctgaaattagaggagaaaaaacaagctcttcaagaag 697
||||||||||| |||| |||| ||||||||||||||||||| | ||||||| ||||||
Sbjct: 656 gagaaacggaaggagttttatatgaaattagaggagaaaaatcgagctcttgaagaag 713
>gnl|LJGI|FS328355 similar to UniRef100_A7QMQ2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 736
Score = 184 bits (93), Expect = 6e-46
Identities = 240/289 (83%)
Strand = Plus / Plus
Query: 340 cagccatctgatttggttactgaaaggcaaggatcctacacacagattgttgatactaaa 399
|||||||||||| || |||||||| ||| | | || ||||||||| |||||||||| ||
Sbjct: 431 cagccatctgatcaggctactgaaaagcatgtaacccacacacagactgttgatactgaa 490
Query: 400 gctgttgcaacaggtctgaacttgtcaccaaatgctaacagcatgcagtcaccttactca 459
||||||||||| | | ||||||||||||||| ||||||| |||| | |||||| | ||
Sbjct: 491 gctgttgcaactgaacagaacttgtcaccaaaagctaacaacatggactcacctaattcc 550
Query: 460 tcaaagaactcgcagccaaacacaccattttcatcaagtaagcccttgcaacttgatgat 519
|||||||| || ||||| |||||||| |||||||||| |||||||||| || |||||||
Sbjct: 551 tcaaagaattcacagccgaacacacctttttcatcaaagaagcccttgccacatgatgat 610
Query: 520 aagaagaactatgatgatgaagataactggtctcttgcttcctctgctttttctatgcgc 579
|||||| || |||||||||||||||| |||||| || ||||||| ||| ||| |||
Sbjct: 611 aagaagcaccatgatgatgaagataattggtctgttacttcctccgctgcatctgcacgc 670
Query: 580 actgctagatctaaggtaactcagggttcagcccctacatttaaatgct 628
|| ||||||||||| || ||| |||||||| |||||||||| |||||
Sbjct: 671 accgctagatctaaagtcactgttggttcagcacctacatttagatgct 719