Miyakogusa Predicted Gene
- Lj5g3v1361530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1361530.1 Non Chatacterized Hit- tr|A5C4J5|A5C4J5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,85.6,0,plant
mutator transposase zinc finger,Zinc finger, PMZ-type; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAM,CUFF.55184.1
(2297 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BF177509 homologue to UniRef100_A7PUN8 Cluster: Chromos... 844 0.0
gnl|LJGI|BP049972 similar to UniRef100_Q9SR14 Cluster: Mutator-l... 634 0.0
gnl|LJGI|BP030148 similar to UniRef100_Q9SR14 Cluster: Mutator-l... 406 e-112
gnl|LJGI|TC77948 homologue to UniRef100_Q9SR14 Cluster: Mutator-... 155 1e-36
>gnl|LJGI|BF177509 homologue to UniRef100_A7PUN8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 426
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 1542 gtattggattcgaagaattccacctcgcctgtgggccacggcttattttgaggggcaaag 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtattggattcgaagaattccacctcgcctgtgggccacggcttattttgaggggcaaag 60
Query: 1602 gtttggtcacttgacagctaacattgttgaatctttaaacacttggatattggaagcatc 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttggtcacttgacagctaacattgttgaatctttaaacacttggatattggaagcatc 120
Query: 1662 tgggcttcccataatccaaatgatggaatgcattagaaggcagctaatgacttggttcaa 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggcttcccataatccaaatgatggaatgcattagaaggcagctaatgacttggttcaa 180
Query: 1722 tgagcgccgcgagaccagcatgcagtgggcctcaattcttgtaccttctgctgagagatg 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagcgccgcgagaccagcatgcagtgggcctcaattcttgtaccttctgctgagagatg 240
Query: 1782 tgttgctgaggctcttgaacgcgcgcgcacatatcaggttcttcgtgccaatgaagctga 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttgctgaggctcttgaacgcgcgcgcacatatcaggttcttcgtgccaatgaagctga 300
Query: 1842 gtttgaagtcatatctcatgaagggtcaaacatagttgatatcaggaaccgttgctgcct 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttgaagtcatatctcatgaagggtcaaacatagttgatatcaggaaccgttgctgcct 360
Query: 1902 ttgccgtggctggcagctctatggcttgccgtgtgcacatgctgtggcagcactcctctc 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgccgtggctggcagctctatggcttgccgtgtgcacatgctgtggcagcactcctctc 420
Query: 1962 ctgcag 1967
||||||
Sbjct: 421 ctgcag 426
>gnl|LJGI|BP049972 similar to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (13%)
Length = 496
Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 1978 catagattcactgaaagctgtttcacggttgcaacttatcgcaagacatactcccaaacc 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 catagattcactgaaagctgtttcacggttgcaacttatcgcaagacatactcccaaacc 437
Query: 2038 atacatccaattcctgatagatctttctggaatgagttgtctattgaggatgcaaatgct 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atacatccaattcctgatagatctttctggaatgagttgtctattgaggatgcaaatgct 377
Query: 2098 aacaaagctgttgaggatgcaaatgctagccaatctattgaaattgttattaacccacct 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aacaaagctgttgaggatgcaaatgctagccaatctattgaaattgttattaacccacct 317
Query: 2158 aaatcactgaggcctccaggaagaccaagaaagaagcgagttcgtgcagaagaccgcggg 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaatcactgaggcctccaggaagaccaagaaagaagcgagttcgtgcagaagaccgcggg 257
Query: 2218 cgtgttaagcgtgtggtgcattgtagtcgctgcaatcaaacaggacactttagaaccaca 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cgtgttaagcgtgtggtgcattgtagtcgctgcaatcaaacaggacactttagaaccaca 197
Query: 2278 tgtgcagcacccatctgata 2297
||||||||||||||||||||
Sbjct: 196 tgtgcagcacccatctgata 177
>gnl|LJGI|BP030148 similar to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 398
Score = 406 bits (205), Expect = e-112
Identities = 349/397 (87%)
Strand = Plus / Plus
Query: 1298 acactgaaaacatgccaaggcttactattctgtctgatagacagaatgcaattgtggatg 1357
||||||||||||||||| ||||||| ||| ||||||| || ||||| | ||||||||||
Sbjct: 1 acactgaaaacatgccacggcttacaattttgtctgacaggcagaaggggattgtggatg 60
Query: 1358 gagtggaagcaaattttcctacagctttccatggattttgcatgcgtcacttgagtgaca 1417
| |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||
Sbjct: 61 gtgtggaagcgaatttcccaacggctttccatggattttgcatgcgccacttgagtgaca 120
Query: 1418 gcttccgcaaggaatttaacaacactatgcttgtcaatcttctctgggaagcagctaatg 1477
|||| |||||||| ||||| ||||| |||||||| |||||||| |||||||||||| |||
Sbjct: 121 gctttcgcaaggagtttaataacaccatgcttgttaatcttctgtgggaagcagctcatg 180
Query: 1478 ctcttactataattgaatatgaagcaaaagttttggagattgaagagatatcacaagatg 1537
||||||| | ||||||| |||| | ||| | || |||||||| ||||||||||||||||
Sbjct: 181 ttcttactgtgattgaatttgaatccaaaatcttagagattgaggagatatcacaagatg 240
Query: 1538 ctgcgtattggattcgaagaattccacctcgcctgtgggccacggcttattttgaggggc 1597
| || || |||||||||||||||||||||||| |||||||||| || || ||||||||||
Sbjct: 241 ccgcatactggattcgaagaattccacctcgcttgtgggccactgcatactttgaggggc 300
Query: 1598 aaaggtttggtcacttgacagctaacattgttgaatctttaaacacttggatattggaag 1657
|||||||||||||||||||||||||||| |||||||| ||| |||| |||||||| || |
Sbjct: 301 aaaggtttggtcacttgacagctaacatagttgaatccttagacacatggatattagatg 360
Query: 1658 catctgggcttcccataatccaaatgatggaatgcat 1694
|||| |||||||||||| | ||||||| |||||||||
Sbjct: 361 catcagggcttcccatagttcaaatgacggaatgcat 397
>gnl|LJGI|TC77948 homologue to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 573
Score = 155 bits (78), Expect = 1e-36
Identities = 132/150 (88%)
Strand = Plus / Plus
Query: 2144 ttattaacccacctaaatcactgaggcctccaggaagaccaagaaagaagcgagttcgtg 2203
|||| |||||||| |||||||| ||||| || ||||| || ||||||||||||||||| |
Sbjct: 115 ttatcaacccacccaaatcactcaggccacctggaaggcctagaaagaagcgagttcgcg 174
Query: 2204 cagaagaccgcgggcgtgttaagcgtgtggtgcattgtagtcgctgcaatcaaacaggac 2263
| |||||||| || ||||| ||| | ||||||||||||||||| |||||||||||||| |
Sbjct: 175 ccgaagaccgtggacgtgtgaagagggtggtgcattgtagtcgttgcaatcaaacaggtc 234
Query: 2264 actttagaaccacatgtgcagcacccatct 2293
||||||| |||||||||||||| |||||||
Sbjct: 235 actttaggaccacatgtgcagctcccatct 264
Score = 101 bits (51), Expect = 2e-20
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 2005 gttgcaacttatcgcaagacatactcccaaaccatacatccaattcctgatagatctttc 2064
||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 3 gttgccacttatcgcaagacatactcacaaaccatacatccaattcctgataagtctttg 62
Query: 2065 tggaatgagttgtct 2079
||||| |||||||||
Sbjct: 63 tggaaggagttgtct 77