Miyakogusa Predicted Gene

Lj5g3v1360470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1360470.1 Non Chatacterized Hit- tr|B9RW56|B9RW56_RICCO
Putative uncharacterized protein OS=Ricinus communis G,40.32,0.011,
,CUFF.55227.1
         (252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76416 similar to UniRef100_Q8GZA8 Cluster: Protein UL...   369   e-102
gnl|LJGI|TC57647 similar to UniRef100_Q8GZA8 Cluster: Protein UL...   103   5e-22

>gnl|LJGI|TC76416 similar to UniRef100_Q8GZA8 Cluster: Protein ULTRAPETALA 1; n=2;
           Arabidopsis thaliana|Rep: Protein ULTRAPETALA 1 -
           Arabidopsis thaliana (Mouse-ear cress), partial (59%)
          Length = 891

 Score =  369 bits (186), Expect = e-102
 Identities = 222/234 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgaagaagagagagcaagtcgtagagtttacaggggatgcaccggttctccagcgt 60
           ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct: 608 atgttgaagaagagagagcaagtcgcagagtttacaggggatgcactggttctcctgcat 667

                                                                       
Query: 61  gcaaagggtgcacttcttgtgtgtgctttggctgtgacatttgcagattttcaaactgca 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 668 gcaaaggatgcacttcttgtgtgtgctttggctgtgacatttgcagattttcagactgca 727

                                                                       
Query: 121 tttgccagacttgcaccgactatacaaggaataatgccaaagcttgagctcagatcttgt 180
            ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 728 cttgccagacttgcactgactatacaaggaataatgccaatgcttgagctcagatcttgt 787

                                                                 
Query: 181 ttcctcttttctgatttttggtaccctttatcttcgtacggacggaattactta 234
           |||||||||||||||||||||||||||||||||||||  |||| ||||||||||
Sbjct: 788 ttcctcttttctgatttttggtaccctttatcttcgtctggactgaattactta 841


>gnl|LJGI|TC57647 similar to UniRef100_Q8GZA8 Cluster: Protein ULTRAPETALA 1; n=2;
            Arabidopsis thaliana|Rep: Protein ULTRAPETALA 1 -
            Arabidopsis thaliana (Mouse-ear cress), partial (87%)
          Length = 1192

 Score =  103 bits (52), Expect = 5e-22
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                        
Query: 16   gagcaagtcgtagagtttacaggggatgcaccggttctccagcgtgcaaagggtgcactt 75
            |||||||||||||||||||||||||||||| | | |||||| | |||||||| |||||||
Sbjct: 888  gagcaagtcgtagagtttacaggggatgcaaccgctctccaacatgcaaaggttgcactt 947

                                                                        
Query: 76   cttgtgtgtgctttggctgtgacatttgcagattttcaaactgcatttgccagacttgca 135
            | |||||||||||||| |||||  | ||| | |||||| | ||||  ||||||||||| |
Sbjct: 948  catgtgtgtgctttgggtgtgatgtctgccgtttttcagattgcagctgccagacttgta 1007

                        
Query: 136  ccgactatacaa 147
            | |||| |||||
Sbjct: 1008 ctgactttacaa 1019