Miyakogusa Predicted Gene
- Lj5g3v1359430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1359430.1 tr|G7IR90|G7IR90_MEDTR Thymidylate kinase
OS=Medicago truncatula GN=MTR_2g084750 PE=3
SV=1,82.01,0,Thymidylate_kin,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; THYMIDYLATE
KINASE,,NODE_61823_length_782_cov_90.118927.path1.1
(702 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73519 similar to UniRef100_A7NVI7 Cluster: Chromosome... 1384 0.0
gnl|LJGI|TC77407 similar to UniRef100_A7PLT7 Cluster: Chromosome... 561 e-159
gnl|LJGI|DC593181 similar to UniRef100_A7PLT7 Cluster: Chromosom... 313 8e-85
>gnl|LJGI|TC73519 similar to UniRef100_A7NVI7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 2493
Score = 1384 bits (698), Expect = 0.0
Identities = 701/702 (99%)
Strand = Plus / Minus
Query: 1 atgatctatggcacattcaggagtttcacaccactagtactgttgcagaattcattgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 atgatctatggcacattcaggagtttcacaccactagtactgttgcagaattcattgaat 2048
Query: 61 tctcgagtgaaattctcctctaagtgttctcctaggaagataacaatggaaggaagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2047 tctcgagtgaaattctcctctaagtgttctcctaggaagataacaatggaaggaagaaag 1988
Query: 121 cttaattgtagcatggagggaaacataaacgagtctagaggtgccttagttgttctagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 cttaattgtagcatggagggaaacataaacgagtctagaggtgccttagttgttctagaa 1928
Query: 181 ggcttggatcgttctgggaagtcttctcagtgtaccagactagtgtcctacttagagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 ggcttggatcgttctgggaagtcttctcagtgtaccagactagtgtcctacttagagggg 1868
Query: 241 caaggaatcaatgctgaactattgagatttcccgaccgaaccacgagtgtcggtcaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 caaggaatcaatgctgaactattgagatttcccgaccgaaccacgagtgtcggtcaaatg 1808
Query: 301 atatctgcctatcttactaacacatcacaattggatgatcataccattcatctcctcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 atatctgcctatcttactaacacatcacaattggatgatcataccattcatctcctcttc 1748
Query: 361 agtgctaaccgttgggagaagcgatcgttgatggaaacaaagctgaaaagtggaacaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 agtgctaaccgttgggagaagcgatcgttgatggaaacaaagctgaaaagtggaacaact 1688
Query: 421 ctcattgttgatcgttattcttattccggggtggctttctcttctgccaaagggcttaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 ctcattgttgatcgttattcttattccggggtggctttctcttctgccaaagggcttaat 1628
Query: 481 tttgaatggtgtaaggccccggagattgggttgttggctcctgatctggttgcatacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 tttgaatggtgtaaggccccggagattgggttgttggctcctgatctggttgcatacctt 1568
Query: 541 gacatatcaccggagaaagctgcagaaagaggagggtatggagatgagagatatgaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 gacatatcaccggagaaagctgcagaaagaggagggtatggagatgagagatatgaaaag 1508
Query: 601 ctcgagtttcagaaaaaagttgctcggagttacaaagttcttcatgatcactcctggaag 660
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1507 ctcgagtttcagaaaaaagttgctcagagttacaaagttcttcatgatcactcctggaag 1448
Query: 661 gttgtagatgcttgccaacccatagaagatgtggagaaacag 702
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 gttgtagatgcttgccaacccatagaagatgtggagaaacag 1406
>gnl|LJGI|TC77407 similar to UniRef100_A7PLT7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 553
Score = 561 bits (283), Expect = e-159
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 47 agaattcattgaattctcgagtgaaattctcctctaagtgttctcctaggaagataacaa 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agaattcattgaattctcgagtgaaattctcctctaagtgttctcctaggaagataacaa 330
Query: 107 tggaaggaagaaagcttaattgtagcatggagggaaacataaacgagtctagaggtgcct 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tggaaggaagaaagcttaattgtagcatggagggaaacataaacgagtctagaggtgcct 390
Query: 167 tagttgttctagaaggcttggatcgttctgggaagtcttctcagtgtaccagactagtgt 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tagttgttctagaaggcttggatcgttctgggaagtcttctcagtgtaccagactagtgt 450
Query: 227 cctacttagaggggcaaggaatcaatgctgaactattgagatttcccgaccgaaccacga 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cctacttagaggggcaaggaatcaatgctgaactattgagatttcccgaccgaaccacga 510
Query: 287 gtgtcggtcaaatgatatctgcctatcttactaacacatcaca 329
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtgtcggtcaaatgatatctgcctatcttactaacacatcaca 553
>gnl|LJGI|DC593181 similar to UniRef100_A7PLT7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 586
Score = 313 bits (158), Expect = 8e-85
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 403 ctgaaaagtggaacaactctcattgttgatcgttattcttattccggggtggctttctct 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctgaaaagtggaacaactctcattgttgatcgttattcttattccggggtggctttctct 527
Query: 463 tctgccaaagggcttaattttgaatggtgtaaggccccggagattgggttgttggctcct 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tctgccaaagggcttaattttgaatggtgtaaggccccggagattgggttgttggctcct 467
Query: 523 gatctggttgcataccttgacatatcaccggagaaagc 560
||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gatctggttgcataccttgacatatcaccggagaaagc 429
Score = 87.7 bits (44), Expect = 9e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 659 aggttgtagatgcttgccaacccatagaagatgtggagaaacag 702
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggttgtagatgcttgccaacccatagaagatgtggagaaacag 342