Miyakogusa Predicted Gene
- Lj5g3v1358140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1358140.1 Non Chatacterized Hit- tr|G7I6T7|G7I6T7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,85.85,0,DUF946,Vacuolar protein sorting-associated protein
62; PRE-MRNA PROCESSING-RELATED,NULL; PRE-MRNA PR,CUFF.55170.1
(1237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW630144 similar to UniRef100_A7Q1K9 Cluster: Chromosom... 975 0.0
gnl|LJGI|TC63875 similar to UniRef100_A7Q1K9 Cluster: Chromosome... 688 0.0
gnl|LJGI|TC60940 583 e-165
>gnl|LJGI|BW630144 similar to UniRef100_A7Q1K9 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 504
Score = 975 bits (492), Expect = 0.0
Identities = 501/504 (99%)
Strand = Plus / Plus
Query: 418 ttgtgttcagcaggcagtgagaagggtaaatgtatagattgcgagggaacggttgtacct 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 ttgtgttcagcaggcagtgagaagggtaaatgtatagattgcgagggaacggttttacct 60
Query: 478 attggaggaacaaatgatggtgccttgtggatcgatttgcctagcgatgaggatgcaaaa 537
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 attggaggaacaaatgatggtgccttttggatcgatttgcctagcgatgaggatgcaaaa 120
Query: 538 aataatctaaagaagggaaacatagagagtgcaaaactatatgttcatgtcaaaccagca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aataatctaaagaagggaaacatagagagtgcaaaactatatgttcatgtcaaaccagca 180
Query: 598 ttgggaggagcctttactgatattgcgatgtgggttttttgccccttcaatggacctgcc 657
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 ttgggaggagcctttactgatattgcggtgtgggttttttgccccttcaatggacctgcc 240
Query: 658 acacttaaagtttcattgatgaacattgagatgaataagatcggtgaacatgtgagtgat 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacttaaagtttcattgatgaacattgagatgaataagatcggtgaacatgtgagtgat 300
Query: 718 tgggagcacttcacccttcgcgtaagcaacttctccggtgagctttggtctgtgtttttc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggagcacttcacccttcgcgtaagcaacttctccggtgagctttggtctgtgtttttc 360
Query: 778 tctgagcatagcggcggaaaatggatagatgcatttgatttggagtttattaaggggaac 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgagcatagcggcggaaaatggatagatgcatttgatttggagtttattaaggggaac 420
Query: 838 aaaccaattgtttattcatcaaaacatggccatgctagctaccctcatgccgggacatac 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaccaattgtttattcatcaaaacatggccatgctagctaccctcatgccgggacatac 480
Query: 898 cttcagggatcatccaaatttgga 921
||||||||||||||||||||||||
Sbjct: 481 cttcagggatcatccaaatttgga 504
>gnl|LJGI|TC63875 similar to UniRef100_A7Q1K9 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 957
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus
Query: 891 gacataccttcagggatcatccaaatttggaataggggtacgcaacgacgcagctcgaag 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gacataccttcagggatcatccaaatttggaataggggtacgcaacgacgcagctcgaag 64
Query: 951 taaatttattgtggattcaagcattaaatatcagattgttgcggctgagtatcttggtgt 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taaatttattgtggattcaagcattaaatatcagattgttgcggctgagtatcttggtgt 124
Query: 1011 tggagttgttactgaaccatgttggttgcagtatatgagagagtggggtcctaccattgt 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggagttgttactgaaccatgttggttgcagtatatgagagagtggggtcctaccattgt 184
Query: 1071 atatgattcacgttctgaaatagagaagataatagacctgcttccagtatttgtcagatt 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atatgattcacgttctgaaatagagaagataatagacctgcttccagtatttgtcagatt 244
Query: 1131 ttccgtggagaacttgattgaattgtttcctacagagctttatggggaggaggggccaac 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttccgtggagaacttgattgaattgtttcctacagagctttatggggaggaggggccaac 304
Query: 1191 aggtcccaaggagaaggacaattggctaggagatgagtattgctagt 1237
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aggtcccaaggagaaggacaattggctaggagatgagtattgctagt 351
>gnl|LJGI|TC60940
Length = 1013
Score = 583 bits (294), Expect = e-165
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 atgggctacaaagccatgggcatagtagttactagcaatccaaatgaaccagaagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atgggctacaaagccatgggcatagtagttactagcaatccaaatgaaccagaagttgat 779
Query: 61 gaagttcgatgtgttcgagcagatctaacacaaacttgtgagacttctgatctattactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaagttcgatgtgttcgagcagatctaacacaaacttgtgagacttctgatctattactt 839
Query: 121 tcaataaagtcaaaatattccaaaaatccattccaggtttggaagacacaaccctgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tcaataaagtcaaaatattccaaaaatccattccaggtttggaagacacaaccctgtgat 899
Query: 181 agaggtatgatggctagaggcgtatctgttgggacattcttttgtggcacctattttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 agaggtatgatggctagaggcgtatctgttgggacattcttttgtggcacctattttgat 959
Query: 241 tctgaacaagtgacggatattgcgtgcttgaagaatcttgattcttccctgcat 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tctgaacaagtgacggatattgcgtgcttgaagaatcttgattcttccctgcat 1013