Miyakogusa Predicted Gene

Lj5g3v1358130.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1358130.1 Non Chatacterized Hit- tr|Q3KJI3|Q3KJI3_PSEPF
Putative uncharacterized protein OS=Pseudomonas
fluore,29.69,0.000000000000006,PRE-MRNA PROCESSING-RELATED,NULL;
PRE-MRNA PROCESSING PROTEIN PRP39-RELATED,NULL; DUF946,Vacuolar
pr,CUFF.55169.1
         (828 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60940                                                     1511   0.0  

>gnl|LJGI|TC60940 
          Length = 1013

 Score = 1511 bits (762), Expect = 0.0
 Identities = 762/762 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtttgggtgttggtgttcttgctgggagtgggacagtgtccctgaattctatgatcct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252  atgtttgggtgttggtgttcttgctgggagtgggacagtgtccctgaattctatgatcct 311

                                                                        
Query: 61   gacacaccacccttttctctgccttcacctcttccacactggccacaaggtagtggtttc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312  gacacaccacccttttctctgccttcacctcttccacactggccacaaggtagtggtttc 371

                                                                        
Query: 121  gcgagcggaagaatatgccttggagaaatcgaagtttcaaaagtgaacaagtttgagaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  gcgagcggaagaatatgccttggagaaatcgaagtttcaaaagtgaacaagtttgagaga 431

                                                                        
Query: 181  gtttggacttccacacatttgcatggaaaaccacagggtttcgcattttatagacctttg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  gtttggacttccacacatttgcatggaaaaccacagggtttcgcattttatagacctttg 491

                                                                        
Query: 241  gaggttcctgatggttttctctgccttggtcattactgccagtccaatgaacagccattt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492  gaggttcctgatggttttctctgccttggtcattactgccagtccaatgaacagccattt 551

                                                                        
Query: 301  agaggatatgttcttgtggcccgtgaaactcctactgaacctgaacctgattgttccgat 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552  agaggatatgttcttgtggcccgtgaaactcctactgaacctgaacctgattgttccgat 611

                                                                        
Query: 361  ggcactgtgttaaaatctccagctctagaaaagccacttaactattcattaatttggagc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612  ggcactgtgttaaaatctccagctctagaaaagccacttaactattcattaatttggagc 671

                                                                        
Query: 421  ttggattcacatgatgattgtgcttacttttggttaccaaaccctccaatgggctacaaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672  ttggattcacatgatgattgtgcttacttttggttaccaaaccctccaatgggctacaaa 731

                                                                        
Query: 481  gccatgggcatagtagttactagcaatccaaatgaaccagaagttgatgaagttcgatgt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732  gccatgggcatagtagttactagcaatccaaatgaaccagaagttgatgaagttcgatgt 791

                                                                        
Query: 541  gttcgagcagatctaacacaaacttgtgagacttctgatctattactttcaataaagtca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  gttcgagcagatctaacacaaacttgtgagacttctgatctattactttcaataaagtca 851

                                                                        
Query: 601  aaatattccaaaaatccattccaggtttggaagacacaaccctgtgatagaggtatgatg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852  aaatattccaaaaatccattccaggtttggaagacacaaccctgtgatagaggtatgatg 911

                                                                        
Query: 661  gctagaggcgtatctgttgggacattcttttgtggcacctattttgattctgaacaagtg 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  gctagaggcgtatctgttgggacattcttttgtggcacctattttgattctgaacaagtg 971

                                                      
Query: 721  acggatattgcgtgcttgaagaatcttgattcttccctgcat 762
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  acggatattgcgtgcttgaagaatcttgattcttccctgcat 1013