Miyakogusa Predicted Gene
- Lj5g3v1355070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1355070.1 CUFF.55182.1
(1791 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60053 similar to UniRef100_A7QMW3 Cluster: Chromosome... 1045 0.0
gnl|LJGI|GO024945 weakly similar to UniRef100_A7QMW3 Cluster: Ch... 200 2e-50
gnl|LJGI|AV770033 weakly similar to UniRef100_A7QMW3 Cluster: Ch... 178 8e-44
gnl|LJGI|AV410916 similar to UniRef100_A6ZRG2 Cluster: Cell wall... 60 5e-08
>gnl|LJGI|TC60053 similar to UniRef100_A7QMW3 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 970
Score = 1045 bits (527), Expect = 0.0
Identities = 530/531 (99%)
Strand = Plus / Plus
Query: 1261 atctttgagaagcttggtgaagtgggttgtcctccaaatgcaagttcatataatacaata 1320
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atctctgagaagcttggtgaagtgggttgtcctccaaatgcaagttcatataatacaata 236
Query: 1321 tttggtgcactgtggagtagtggtgacaaaattcgagcattgaggatgattttagagatg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tttggtgcactgtggagtagtggtgacaaaattcgagcattgaggatgattttagagatg 296
Query: 1381 ttggacaagggtattgatcctgatgggatcacctataattcacttatatcttgtttgtgc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttggacaagggtattgatcctgatgggatcacctataattcacttatatcttgtttgtgc 356
Query: 1441 agagatggattggtggatgaggcagttgagttgttagtggacatggaaagtagcaagagt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agagatggattggtggatgaggcagttgagttgttagtggacatggaaagtagcaagagt 416
Query: 1501 caaccttcagttatcagctacaatattgttcttctgggattgtgcaaggtgcacagaatc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 caaccttcagttatcagctacaatattgttcttctgggattgtgcaaggtgcacagaatc 476
Query: 1561 attgaagccattgaggtgctagctgccatggttgacaaaggatgtcagccaaatgaaact 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 attgaagccattgaggtgctagctgccatggttgacaaaggatgtcagccaaatgaaact 536
Query: 1621 acatacactttgttggttgaagggattggttttgcgggatggcgaaacgatgcaatgcag 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acatacactttgttggttgaagggattggttttgcgggatggcgaaacgatgcaatgcag 596
Query: 1681 ctggcgaattcccttgttagcattaatgctatttctgaagattctttgagacgtttgaac 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctggcgaattcccttgttagcattaatgctatttctgaagattctttgagacgtttgaac 656
Query: 1741 aagacttttcccttgcttgatgtgtacaaagagctagctttatcagattga 1791
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aagacttttcccttgcttgatgtgtacaaagagctagctttatcagattga 707
Score = 210 bits (106), Expect = 2e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 atgacaacagtttcaactgaattcctgtcaaggaatctcccaatcagaacccatttgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgacaacagtttcaactgaattcctgtcaaggaatctcccaatcagaacccatttgaaa 131
Query: 61 catcatcgtcatcatccaaatcccaacacactcatcactcgcaaaa 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 catcatcgtcatcatccaaatcccaacacactcatcactcgcaaaa 177
>gnl|LJGI|GO024945 weakly similar to UniRef100_A7QMW3 Cluster: Chromosome chr14
scaffold_128, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_128, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 700
Score = 200 bits (101), Expect = 2e-50
Identities = 243/289 (84%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 874 ccggatgtgatttcttataacattctgctgaggggtcttttgaatgaaggcaaatgggaa 933
||||||||||| ||||||| ||||||| || | || ||| ||||| || | |||||||||
Sbjct: 400 ccggatgtgatatcttatagcattctgttgcgagggcttctgaatcaaaggaaatgggaa 459
Query: 934 gctggagagaggttgatggctgatatgttggtgaaaggttgcgagccgaatgttgttacc 993
| |||||||| |||||| |||||||| | |||||||| ||||| |||||||| ||
Sbjct: 460 gatggagagaaattgatgtctgatatgctttcaaaaggttgtgagccaaatgttgtgact 519
Query: 994 tacagcattttgatcagctcgctctgtcgcgatggccaaattgatgaggcgatgaatgtg 1053
|||||||||||||| || ||| | ||||| |||||| || |||| |||||| ||| | ||
Sbjct: 520 tacagcattttgattagttcgttatgtcgtgatggcaaagttgaggaggcggtgagtttg 579
Query: 1054 ttgaaggttatgaaggagaaggggttgactcctgatgcttacagctatgatccattgatt 1113
||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 580 ttgaaggttatgaaggaacaggggttgacccctgatgcttatagctatgatcctttgatt 639
Query: 1114 tctgcattctgcaaagagggcagagtggatttggcaatagagttgttgg 1162
| ||||||||||||||| | || ||||||||||| |||||||| ||||
Sbjct: 640 gcggcattctgcaaagagagtag-gtggatttggcgatagagttcttgg 687
>gnl|LJGI|AV770033 weakly similar to UniRef100_A7QMW3 Cluster: Chromosome chr14
scaffold_128, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_128, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 298
Score = 178 bits (90), Expect = 8e-44
Identities = 171/198 (86%)
Strand = Plus / Minus
Query: 1501 caaccttcagttatcagctacaatattgttcttctgggattgtgcaaggtgcacagaatc 1560
|||||||||||||| || ||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct: 277 caaccttcagttattagttacaacattgttcttcttggattgagcaaagtgcacagaatc 218
Query: 1561 attgaagccattgaggtgctagctgccatggttgacaaaggatgtcagccaaatgaaact 1620
|| |||||||||||| ||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 217 tccgatgccattgaggtgttagctgcgatggttgacaaagggtgtcggccaaatgaaact 158
Query: 1621 acatacactttgttggttgaagggattggttttgcgggatggcgaaacgatgcaatgcag 1680
|| ||||| |||||||||||||||||||||| ||| || |||| | | ||||| ||| ||
Sbjct: 157 acttacacattgttggttgaagggattggttatgctggctggccagatgatgctatggag 98
Query: 1681 ctggcgaattcccttgtt 1698
|| || | ||||||||||
Sbjct: 97 ctagctatttcccttgtt 80
>gnl|LJGI|AV410916 similar to UniRef100_A6ZRG2 Cluster: Cell wall integrity and stress
response component; n=1; Saccharomyces cerevisiae
YJM789|Rep: Cell wall integrity and stress response
component - Saccharomyces cerevisiae (strain YJM789)
(Baker's yeast), partial (4%)
Length = 256
Score = 60.0 bits (30), Expect = 5e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 330 catggtcagcaaaggttacaaacctgatgttatcctctgtaccaagctgatcaagggg 387
|||||||||||| |||||||||||||||||| | |||| |||||| | |||||||||
Sbjct: 199 catggtcagcaagggttacaaacctgatgttgtaatctgcaccaagatcatcaagggg 256