Miyakogusa Predicted Gene
- Lj5g3v1353010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1353010.1 Non Chatacterized Hit- tr|F6H618|F6H618_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,76.14,0,DUF640,Domain of unknown function DUF640; seg,NULL; FAMILY
NOT NAMED,NULL,CUFF.55178.1
(562 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75394 similar to UniRef100_A7QMV1 Cluster: Chromosome... 601 e-171
gnl|LJGI|TC77999 homologue to UniRef100_A7Q1S2 Cluster: Chromoso... 511 e-144
gnl|LJGI|TC81799 similar to UniRef100_A7NYA4 Cluster: Chromosome... 64 1e-09
gnl|LJGI|TC79052 homologue to UniRef100_A7NXD0 Cluster: Chromoso... 56 2e-07
gnl|LJGI|TC60100 54 1e-06
>gnl|LJGI|TC75394 similar to UniRef100_A7QMV1 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 736
Score = 601 bits (303), Expect = e-171
Identities = 312/315 (99%)
Strand = Plus / Plus
Query: 248 accagttcgggaagacgaaggttcacaaccatccttgcccgttcttcgggcttccgaacc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accagttcgggaagacgaaggttcacaaccatccttgcccgttcttcgggcttccgaacc 60
Query: 308 cgcctgctccctgcccctgcccgctccggcaggcatggggaagtctcgacgcgctcatcg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcctgctccctgcccctgcccgctccggcaggcatggggaagtctcgacgcgctcatcg 120
Query: 368 gacgtctacgcgccgcctatgaggagaacggaggtaggccggagacgaacccgttcggtg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacgtctacgcgccgcctatgaggagaacggaggtaggccggagacgaacccgttcggtg 180
Query: 428 ctcgcgcggtgaggatttacctccgggatgttcgtgacttccagacgaaggcgagaggtg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgcgcggtgaggatttacctccgggatgttcgtgacttccagacgaaggcgagaggtg 240
Query: 488 ttagctatgagaagaagaggaagaggcctaagcccaagatgataacaaccaccgctgcaa 547
||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 241 ttagctatgagaagaagaggaagaggcctaagcccaagatgattactacccccgctgcaa 300
Query: 548 ctgcttctacttagt 562
|||||||||||||||
Sbjct: 301 ctgcttctacttagt 315
>gnl|LJGI|TC77999 homologue to UniRef100_A7Q1S2 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 916
Score = 511 bits (258), Expect = e-144
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atggatttggtttctgaatcaacaacgtcaacgccgatcacgccaccaaccatgagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atggatttggtttctgaatcaacaacgtcaacgccgatcacgccaccaaccatgagcatt 718
Query: 61 tcagcttccgccaccggaagcagcggtactgtaaccacccccaccgcggccacgactccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcagcttccgccaccggaagcagcggtactgtaaccacccccaccgcggccacgactccg 778
Query: 121 agccgttacgagaaccagaagcggcgagactggaacacgttctgccagtaccttcgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 agccgttacgagaaccagaagcggcgagactggaacacgttctgccagtaccttcgaaac 838
Query: 181 caccgtccgccgctgtcgctgtctctctgcagcggcgcgcacgtgctggagtttctccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 caccgtccgccgctgtcgctgtctctctgcagcggcgcgcacgtgctggagtttctccac 898
Query: 241 tatctcgaccagttcggg 258
||||||||||||||||||
Sbjct: 899 tatctcgaccagttcggg 916
>gnl|LJGI|TC81799 similar to UniRef100_A7NYA4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 473
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 120 gagccgttacgagaaccagaagcggcgagactggaacacgttctgccagtaccttcgaaa 179
||||||||||||| ||||| |||||||||||||||||||||| |||||||| || ||
Sbjct: 352 gagccgttacgagtcacagaaacggcgagactggaacacgttcttacagtacctacggaa 411
Query: 180 ccac 183
||||
Sbjct: 412 ccac 415
>gnl|LJGI|TC79052 homologue to UniRef100_A7NXD0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 565
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 391 gagaacggaggtaggccggagacgaacccgttcggtgctcgcgcggtgaggatttacctc 450
||||| ||||| | ||||||| ||||||| ||||||||||| ||||||||| | |||||
Sbjct: 77 gagaatggagggaagccggaggcgaaccctttcggtgctcgagcggtgaggctctacctt 136
Query: 451 cgggatgttcgtgact 466
|| || || |||||||
Sbjct: 137 cgtgaagtgcgtgact 152
>gnl|LJGI|TC60100
Length = 829
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 343 tggggaagtctcgacgcgctcatcggacgtctacgcgccgcctatgaggagaacggaggt 402
|||||||| |||||||||||||||||| | |||| || ||||| || || |||||||||
Sbjct: 366 tggggaagcctcgacgcgctcatcggaaggttacgagctgcctacgaagaaaacggaggt 425
Query: 403 aggccggagac 413
|||||||||
Sbjct: 426 ttgccggagac 436