Miyakogusa Predicted Gene
- Lj5g3v1351990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1351990.1 tr|G7JTT9|G7JTT9_MEDTR Dihydroorotase OS=Medicago
truncatula GN=MTR_4g078370 PE=3 SV=1,90,0,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; DIHYDROOROTASE_2,Dihydroorotase, conserved
site; Am,CUFF.55177.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60686 similar to UniRef100_A5JJV0 Cluster: Mitochondr... 1233 0.0
gnl|LJGI|TC77519 similar to UniRef100_A5JJV0 Cluster: Mitochondr... 761 0.0
gnl|LJGI|TC67459 similar to UniRef100_A5JJV0 Cluster: Mitochondr... 638 0.0
gnl|LJGI|TC66660 homologue to UniRef100_A5JJV0 Cluster: Mitochon... 327 5e-89
>gnl|LJGI|TC60686 similar to UniRef100_A5JJV0 Cluster: Mitochondrial dihydroorotase;
n=1; Vicia faba|Rep: Mitochondrial dihydroorotase - Vicia
faba (Broad bean), complete
Length = 1410
Score = 1233 bits (622), Expect = 0.0
Identities = 655/666 (98%)
Strand = Plus / Plus
Query: 1 atggttgagcaagatttaccattattggttcatggagaggttacaaatccagaagttgat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atggttgagcaagatttgccattattggttcatggagaggttacaaatccagaagttgat 591
Query: 61 gtttttgaccgggaaaaggtcttcattgaaactatcttagagcctttagttcaaaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtttttgaccgggaaaaggtcttcattgaaactatcttagagcctttagttcaaaggctt 651
Query: 121 ccacggctgaaggttgtgatggagcatattaccaccatggatgctgttaaatttgtagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ccacggctgaaggttgtgatggagcatattaccaccatggatgctgttaaatttgtagaa 711
Query: 181 tcttgcaaagaaggcaatgttgcagcaactgttacaccacagcatctttttctcaatcgt 240
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 712 tcttgcaaagaaggttatgttgcagcaactgtgacaccacagcatctttttctcaatcgt 771
Query: 241 aatgctttgttccaaggtggcttacaacctcacaattactgtcttccagtgctcaaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aatgctttgttccaaggtggcttacaacctcacaattactgtcttccagtgctcaaaaga 831
Query: 301 gagatccacagacaggccattgtttcagctgtcactggtggaagtacacggtttttcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gagatccacagacaggccattgtttcagctgtcactggtggaagtacacggtttttcctc 891
Query: 361 ggaactgatagtgctccacatgataggcgtaacaaggaatgttcgtgtggatgtgctggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ggaactgatagtgctccacatgataggcgtaacaaggaatgttcgtgtggatgtgctggc 951
Query: 421 atatacaactccctggttgctctatccatatatgcgaaggtttttgaagaggccggtgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 952 atatacaactccctggttgctctatccatatatgcgaaggtttttgaagaggctggtgca 1011
Query: 481 cttgacaagctggaggcttttacaagttttaacggacctgacttctacggcctccccagg 540
||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1012 cttgataagctggaggcttttacaagttttaatggacctgacttttacggcctccccaga 1071
Query: 541 aacaagctaaagattaaactgaggaaagctccatggagagttcctgagtatttgtcattt 600
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1072 aacaagctaaagattaaactgaggaaagctccttggagagtacctgagtatttgtcattt 1131
Query: 601 ccattcggagatattgttcccatgtgtgctggtcaaacacttgaatgggaggcgttgctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 ccattcggagatattgttcccatgtgtgctggtcaaacacttgaatgggaggcgttgctt 1191
Query: 661 aattaa 666
||||||
Sbjct: 1192 aattaa 1197
>gnl|LJGI|TC77519 similar to UniRef100_A5JJV0 Cluster: Mitochondrial dihydroorotase;
n=1; Vicia faba|Rep: Mitochondrial dihydroorotase -
Vicia faba (Broad bean), partial (38%)
Length = 695
Score = 761 bits (384), Expect = 0.0
Identities = 473/494 (95%), Gaps = 9/494 (1%)
Strand = Plus / Plus
Query: 182 cttgcaaagaaggcaatgttgcagcaactgttacaccacagcatctttttctcaatcgta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgcaaagaaggcaatgttgcagcaactgttacaccacagcatctttttctcaatcgta 60
Query: 242 atgctttgttccaaggtggcttacaacctcacaattactgtcttccagtgctcaaaagag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgctttgttccaaggtggcttacaacctcacaattactgtcttccagtgctcaaaagag 120
Query: 302 agatccacagacaggccattgtttcagctgtcactggtggaagtacacggtttttcctcg 361
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 agatccatagacaggccattgtttcagctgtcactggtggaagtacacggtttttccttg 180
Query: 362 gaactgatagtgctccacatgataggcgtaacaaggaatgttcgtgtggatgtgctggca 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 gaactgatagtgctccacatgataggcgtaacaaggaatgttcgtgtggatgtgctagca 240
Query: 422 tatacaactccctggttgctctatccatatatgcgaaggtttttgaagaggccggtgcac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatacaactccctggttgctctatccatatatgcgaaggtttttgaagaggccggtgcac 300
Query: 482 ttga-caagctggaggcttttacaagttttaacggacctgacttctacggcctccccagg 540
|||| | |||||||||||||||| |||||||||||||||||||| |||||||||| ||||
Sbjct: 301 ttgacccagctggaggcttttaccagttttaacggacctgacttttacggcctcctcagg 360
Query: 541 aacaagctaaagattaaactgaggaaagctcca-tgga-gagttcctgagtatttgtcat 598
|| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 361 caccagctaaagattaaactgaggaaagctccactggacgagttcctgagtatttgtcat 420
Query: 599 ttcca-ttcggagatattgttccca-tgt---gtgctggtcaaaca-cttgaatgggagg 652
||||| ||||||||||||||||||| ||| ||||||| |||| |||||||||||||
Sbjct: 421 ttccacttcggagatattgttcccactgtcgctcgctggtccaacaccttgaatgggagg 480
Query: 653 cgttgcttaattaa 666
||||||||||||||
Sbjct: 481 cgttgcttaattaa 494
>gnl|LJGI|TC67459 similar to UniRef100_A5JJV0 Cluster: Mitochondrial dihydroorotase;
n=1; Vicia faba|Rep: Mitochondrial dihydroorotase -
Vicia faba (Broad bean), partial (30%)
Length = 685
Score = 638 bits (322), Expect = 0.0
Identities = 325/326 (99%)
Strand = Plus / Plus
Query: 341 gaagtacacggtttttcctcggaactgatagtgctccacatgataggcgtaacaaggaat 400
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagtacacggtttttccttggaactgatagtgctccacatgataggcgtaacaaggaat 60
Query: 401 gttcgtgtggatgtgctggcatatacaactccctggttgctctatccatatatgcgaagg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcgtgtggatgtgctggcatatacaactccctggttgctctatccatatatgcgaagg 120
Query: 461 tttttgaagaggccggtgcacttgacaagctggaggcttttacaagttttaacggacctg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttttgaagaggccggtgcacttgacaagctggaggcttttacaagttttaacggacctg 180
Query: 521 acttctacggcctccccaggaacaagctaaagattaaactgaggaaagctccatggagag 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttctacggcctccccaggaacaagctaaagattaaactgaggaaagctccatggagag 240
Query: 581 ttcctgagtatttgtcatttccattcggagatattgttcccatgtgtgctggtcaaacac 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcctgagtatttgtcatttccattcggagatattgttcccatgtgtgctggtcaaacac 300
Query: 641 ttgaatgggaggcgttgcttaattaa 666
||||||||||||||||||||||||||
Sbjct: 301 ttgaatgggaggcgttgcttaattaa 326
>gnl|LJGI|TC66660 homologue to UniRef100_A5JJV0 Cluster: Mitochondrial dihydroorotase;
n=1; Vicia faba|Rep: Mitochondrial dihydroorotase - Vicia
faba (Broad bean), partial (21%)
Length = 1472
Score = 327 bits (165), Expect = 5e-89
Identities = 211/225 (93%), Gaps = 6/225 (2%)
Strand = Plus / Plus
Query: 35 gagaggttacaaatccagaagttgatgtttttgaccgggaaaaggtcttcattgaaacta 94
|||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 1251 gagaggttacaaatccagaagttgatgtttttgatcaggaaaaggtcttcattgagtcta 1310
Query: 95 tcttagagcctttagttcaaaggcttccacggctgaaggttgtgatggagcatattacca 154
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1311 tcttagagcctttagttcaaaggcttccacagctgaaggttgtgatggagcatattacca 1370
Query: 155 ccatggatgctgttaaatttgtagaatcttgcaaagaaggcaatgttgcagcaactgtta 214
||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1371 ccatggatgatgttaaatttgtagaatcttgcaaagaagg---tgtagcagcaactgtta 1427
Query: 215 caccacagcatctttttctcaatcgtaatgctttgttccaaggtg 259
||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1428 caccacaacatc---ttctcaatcgtaatgctttgttccaaggtg 1469